aidarodrigo

aidarodrigo's Stars

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.2k24823975

• griffithlab/rnaseq_tutorial

  Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

  Language:R1.3k18241622

• crazyhottommy/RNA-seq-analysis

  RNAseq analysis notes from Ming Tang

  Language:Python887787295

• hemberg-lab/scRNA.seq.course

  Analysis of single cell RNA-seq data course

  Language:TeX6716261360

• agitter/single-cell-pseudotime

  An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

  39932161

• jespermaag/gganatogram

  Create anatograms using ggplot2

  Language:R38192752

• spacetx/starfish

  starfish: unified pipelines for image-based transcriptomics

  Language:Python2251868867

• czbiohub-sf/tabula-muris

  Code and annotations for the Tabula Muris single-cell transcriptomic dataset.

  Language:HTML1851116190

• AllonMKlein/scrublet

  Detect doublets in single-cell RNA-seq data

  Language:Jupyter Notebook8514026

• dynverse/dynverse

  A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍

  Language:R728415

• diazlab/scell

  Single-CELL rna-seq analysis software

  Language:MATLAB386111

• stephaniehicks/bioconductorNotes

  My notes/usage examples for various Bioconductor packages

  Language:HTML15204

• AllenInstitute/tasic2016data

  Single cell transcriptomic data from Tasic, et al. (2016)

  Language:R9150