Pinned Repositories
ajw2329.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
blogs_tutorials
cds_insertion
Tool for identifying CDS in unannotated transcripts based on in silico translation from overlapping annotated start codons. Enclosed tools also help infer coding-associated properties of pairwise alternative splicing events.
clusGapKB
Parallelised Gap Statistic (Tibshirani et al., 2001) calculation and clustering
congress_twitter
Use machine learning to classify tweets by members of congress as republican/democrat.
data-driven-web-apps-with-flask
Course demo code and other hand-out materials for our data driven web apps in Flask course
junctionCounts
Utils for identifying pairwise alternative splicing events and quantifying them using junction reads.
splice_lib_utils
Tools for analyzing pairwise alternative splicing events generated by splice_lib/junctionCounts
transcript_tools
Tools for adding, translating, and understanding the consequences of coding sequences with respect to transcript structure
openoasis
ajw2329's Repositories
ajw2329/junctionCounts
Utils for identifying pairwise alternative splicing events and quantifying them using junction reads.
ajw2329/transcript_tools
Tools for adding, translating, and understanding the consequences of coding sequences with respect to transcript structure
ajw2329/ajw2329.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
ajw2329/blogs_tutorials
ajw2329/cds_insertion
Tool for identifying CDS in unannotated transcripts based on in silico translation from overlapping annotated start codons. Enclosed tools also help infer coding-associated properties of pairwise alternative splicing events.
ajw2329/clusGapKB
Parallelised Gap Statistic (Tibshirani et al., 2001) calculation and clustering
ajw2329/congress_twitter
Use machine learning to classify tweets by members of congress as republican/democrat.
ajw2329/data-driven-web-apps-with-flask
Course demo code and other hand-out materials for our data driven web apps in Flask course
ajw2329/splice_lib_utils
Tools for analyzing pairwise alternative splicing events generated by splice_lib/junctionCounts
ajw2329/ggsashimi
Command-line tool for the visualization of splicing events across multiple samples
ajw2329/links
Links to my various pages and projects.
ajw2329/ml_zoomcamp
DataTalks.club ML zoomcamp
ajw2329/multi_species_as_events
ajw2329/MutationalPatterns
R package for extracting and visualizing mutational patterns in base substitution catalogues
ajw2329/Portfolio-Linktree
portfolio in the style of linktree
ajw2329/splice_lib