Reanalysis of PCR sensitivity estimation in Yokota et al. (2020)
Source code accompanying a Letter to the Editor: correspondence to Yokota et al. "Mass screening of asymptomatic persons for SARS-CoV-2 using saliva". https://academic.oup.com/cid/advance-article/doi/10.1093/cid/ciaa1388/5911780
The letter has been accepted for publication in Clinical Infectious Diseases Published by Oxford University Press (doi:10.1093/cid/ciaa1656).
Main files
- reanalysis_Yokota2020.ipynb/.html: Jupyter Notebook reanalysing Yokota et al.
- Letter_to_the_Editor.pdf: Manuscript PDF.
Licence
Dependencies
- Julia ver. 1.2.0
- Distributions.jl ver. 0.21.2
- Mamba.jl ver. 0.12.2
- Plots.jl ver. 0.27.0
- RCall.jl ver. 0.13.4
- R ver. 3.6.1
- {synchrony} ver. 0.3.8
- IJulia.jl ver. 1.20.0
- Python ver. 3.7.4
- Jupyter Notebook ver. 4.5.0