akrinos
Postdoc; PhD from MIT-WHOI Joint Program in Biological Oceanography; learning more about [aquatic microbial] ecology, modeling, coding/computing, global change
MIT
Pinned Repositories
2021-Homework1b-Python
Arianna's try for Homework 1b
2021-phyto-phys
A repository and readthedocs for the Fall 2021 course in Marine Phytoplankton Physiology led by Prof. Mick Follows and co-organized by Arianna Krinos.
2022-Krinos-eukrhythmic
Code and data repository for 2022 eukrhythmic manuscript.
2023-env-bioinformatics-snakemake
Repository for the Snakemake lectures of the Fall 2023 Environmental Bioinformatics course.
2023-euk-diversity
Clean version of repo for 2023 "euk-diversity" paper on taxonomic annotation of meta-omic sequences
2023-Homework1a-Python
2023-Krinos-Mendota18S
Code and associated figures for 2022 paper on Mendota 18S sequences.
2023-math-review-R
R exercises for the WHOI summer math review in 2023.
adventofcode
tax-aliquots
Taxonomic annotation tool using a two-tier approach.
akrinos's Repositories
akrinos/tax-aliquots
Taxonomic annotation tool using a two-tier approach.
akrinos/2021-Homework1b-Python
Arianna's try for Homework 1b
akrinos/2021-phyto-phys
A repository and readthedocs for the Fall 2021 course in Marine Phytoplankton Physiology led by Prof. Mick Follows and co-organized by Arianna Krinos.
akrinos/2022-Krinos-eukrhythmic
Code and data repository for 2022 eukrhythmic manuscript.
akrinos/2023-env-bioinformatics-snakemake
Repository for the Snakemake lectures of the Fall 2023 Environmental Bioinformatics course.
akrinos/2023-euk-diversity
Clean version of repo for 2023 "euk-diversity" paper on taxonomic annotation of meta-omic sequences
akrinos/2023-Homework1a-Python
akrinos/2023-Krinos-Mendota18S
Code and associated figures for 2022 paper on Mendota 18S sequences.
akrinos/2023-math-review-R
R exercises for the WHOI summer math review in 2023.
akrinos/adventofcode
akrinos/akrinos-minimal.github.io
akrinos/akrinos.github.io
Temporary location for revamped website
akrinos/akrinos.labwebsite.github.io
akrinos/akrinos_oldsite
akrinos/akrinoshugosite
akrinos/akrinos.github.io_pre_phd
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
akrinos/bluecrab-agent
akrinos/bluecrabmodel
An agent-based model for tracking blue crab populations in the Chesapeake Bay.
akrinos/data-analysis-2021
A binderized repository for the Data Analysis lesson of the WHOI Summer Math Review, August 2021.
akrinos/hugo-academic-akrinos-site
akrinos/HW_assignment_2
akrinos/Lab-Snakemake
akrinos/newt-long-term-2020
Data and code associated with Walke et al 2020, newt long-term skin microbial community paper
akrinos/python-novice-gapminder
Plotting and Programming in Python
akrinos/python-novice-inflammation
Programming with Python
akrinos/sourmash
Compute and compare MinHash signatures for DNA data sets.
akrinos/starter-hugo-academic
akrinos/starter-hugo-academic-1
🎓 Hugo Academic Theme 创建一个学术网站. Easily create a beautiful academic résumé or educational website using Hugo, GitHub, and Netlify.
akrinos/stella
For characterizing flares with convolutional neural networks
akrinos/test-workflows
A series of test workflows with minimal software dependencies to check vortex swap