Pinned Repositories
colored-noise
An implementation of the sparse convolution algorithm (Lewis, 1989) for generating solid time-series of colored noise.
dino
Modern Jabber/XMPP Client using GTK+/Vala
emd-falsify
Original implementation of the EMD (empirical model discrepancy) model comparison criterion
fokker-planck-brief-intro
A brief, opinionated introduction to the Fokker-Planck equation
parameters
Management of large, hierarchical parameter sets for modelling and simulation
portfolio
Alexandre René’s personal webpage
scityping
sinn-full
An end-to-end project template for inferring parameters of dynamical systems, using Sinn, PyMC3 and Aesara
smttask
Maintain an electronic lab book for computational research
sinn
A library for both Simulation and INference of dynamical systems. Maintained by @alcrene
alcrene's Repositories
alcrene/smttask
Maintain an electronic lab book for computational research
alcrene/fokker-planck-brief-intro
A brief, opinionated introduction to the Fokker-Planck equation
alcrene/parameters
Management of large, hierarchical parameter sets for modelling and simulation
alcrene/portfolio
Alexandre René’s personal webpage
alcrene/scityping
alcrene/sinn-full
An end-to-end project template for inferring parameters of dynamical systems, using Sinn, PyMC3 and Aesara
alcrene/colored-noise
An implementation of the sparse convolution algorithm (Lewis, 1989) for generating solid time-series of colored noise.
alcrene/emd-falsify
Original implementation of the EMD (empirical model discrepancy) model comparison criterion
alcrene/valconfig
Simple, extendable configuration files, using Pydantic for validation.
alcrene/frantic
Modular C++ integrators for stochastic delayed differential equations
alcrene/FrEIA
Framework for Easily Invertible Architectures
alcrene/gatsby-theme-intro
Personal branding theme for developers
alcrene/gatsby-theme-intro-academic
An academic variant of the Intro. personal branding theme for Gatsby
alcrene/kaobook
A LaTeX class for books, reports or theses based on https://github.com/kenohori/thesis and https://github.com/Tufte-LaTeX/tufte-latex.
alcrene/lapreprint
A template for easily creating pretty, nicely formatted preprints in LaTeX
alcrene/MarkdownPreview
Markdown preview and build plugin for Sublime Text https://facelessuser.github.io/MarkdownPreview/
alcrene/mcbackend
A backend for storing MCMC draws.
alcrene/metalogistic
A Python package for the metalogistic (or metalog) distribution, a flexible probability distribution that can be used to model data without traditional parameters.
alcrene/MyST-NB-Bokeh
Pasting Bokeh figures in MyST-NB
alcrene/myst-template-pnas2023
Template for preparing a research report submission to PNAS. Based on the official Overleaf template.
alcrene/myst-templates
List of all MyST Markdown community templates.
alcrene/mystjs
Parser and CLI for MyST Markdown, built in Javascript
alcrene/publish-to-pypi
Short guidelines to get a Python project to PyPI as painlessly as possible
alcrene/pyloric-network-simulator
Pure-Python, JAX-accelerate implementation of the pyloric circuit model described by Prinz et al (Nat. Neurosci., 2004)
alcrene/pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
alcrene/Python-Module-of-the-Week
alcrene/reveal.js
Personal reveal.js fork
alcrene/sphinx
Main repository for the Sphinx documentation builder
alcrene/sphinx-book-theme
A clean book theme for scientific explanations and documentation with Sphinx
alcrene/sumatra