Pinned Repositories
allen_ish_downloader
chainlit_mistral_nonlocal
clustering-dwave
effective_connectivity_toolbox
hese scripts aim at computing the effective connectivity by using functional and structural MRI data, as in A.Crimi et al. "Effective Brain Connectivity Through a Constrained Autoregressive Model" MICCAI 2016
malaria_detection_and_generation
misfoldedproteins_connectome
neurogenomics
CCA in R between neuroimaging and genetics data
Nifti_histogram_normalization
It normalizes the intensity of a given brain from MRI data according to another reference brain scan
python_blender
tracktools
Collection of scripts useful for tracks manipulation, HTML loading, 3D printing
alecrimi's Repositories
alecrimi/random_MachineLearning_stuff
I collect here some scripts and data very useful in different projects or too small to represent a repo
alecrimi/deepmalaria
Tonny's master thesis
alecrimi/SEIR_COV19
SEIR implementation of forecast epidemics
alecrimi/arcAb_mouse
alecrimi/3Dprinting_tractography
alecrimi/thermocycler
alecrimi/plaque_space
D. Kirschenbaum et al.
alecrimi/prionatlas
alecrimi/misfoldedproteins_connectome
alecrimi/dyfunconnclustering
alecrimi/AMBA_downloader
Allen Mouse Brain script to analyze
alecrimi/cells_tools
alecrimi/diabetesUP
Source XML for the CommcareHQ app related to the DiabetesUp project
alecrimi/muse_brain_display
Display of 3-D brain activity from the Muse EEG headset
alecrimi/multi-link
Multi-Link Analysis:Case-Control Brain Network Comparison via Sparse Connectivity Analysis
alecrimi/demo_uarm_python
Simple scripts for moving the uARM robot in python
alecrimi/website
alecrimi/helas_segmentation
alecrimi/priottone
alecrimi/test
alecrimi/DTItutorial
alecrimi/neurogenomics
CCA in R between neuroimaging and genetics data
alecrimi/smartband
alecrimi/ConnectomeTMS
alecrimi/autism
ABIDE2 preprocessed dataset and scripts
alecrimi/tumor_connectome
alecrimi/Sandbox-Furret-
Temporary script for the furret
alecrimi/D3JS_brain
Scripts for brain data visualization
alecrimi/Nifti_histogram_normalization
It normalizes the intensity of a given brain from MRI data according to another reference brain scan
alecrimi/Extended_Kalman_filter
Extended version oft he Kalman filter for vessel tracking, it updates the state according to the "Star" algorithm and has confidence estimate to slow down the Kalman filter