Pinned Repositories
Assembly
This repository contains the reference genome assembly Ash1, built from data collected from an Ashkenazi individual.
bioconda-recipes
Conda recipes for the bioconda channel.
eviann
eukaryotic annotation pipeline
EviAnn_release
This is the standalone version of the EviAnn pipeline
horient
hierarchical orientation solver for scaffolding
JASPER_release
This is integrated version of JASPER polisher
masurca
SOAPdenovo2
SuperReads
WheresWalker
alekseyzimin's Repositories
alekseyzimin/masurca
alekseyzimin/EviAnn_release
This is the standalone version of the EviAnn pipeline
alekseyzimin/eviann
eukaryotic annotation pipeline
alekseyzimin/WheresWalker
alekseyzimin/SuperReads
alekseyzimin/horient
hierarchical orientation solver for scaffolding
alekseyzimin/JASPER_release
This is integrated version of JASPER polisher
alekseyzimin/SOAPdenovo2
alekseyzimin/wgs
alekseyzimin/Assembly
This repository contains the reference genome assembly Ash1, built from data collected from an Ashkenazi individual.
alekseyzimin/bioconda-recipes
Conda recipes for the bioconda channel.
alekseyzimin/contributor_covenant
Pledge your respect and appreciation for contributors of all kinds to your open source project.
alekseyzimin/Flye
Fast and accurate de novo assembler for single molecule sequencing reads
alekseyzimin/freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
alekseyzimin/isolore
alekseyzimin/Jellyfish
A fast multi-threaded k-mer counter
alekseyzimin/jf_aligner
fast approximate aligner for genomic sequences
alekseyzimin/mer_polish
fall 2021
alekseyzimin/PacBio
alekseyzimin/prepare
alekseyzimin/project_stub
empty project for automake setup
alekseyzimin/Quorum
QUality Optimized Reads from the University of Maryland
alekseyzimin/ReBuild
alekseyzimin/samtools
alekseyzimin/SuperReads_RNA
alekseyzimin/SuperReadsR
super-reads for RNAseq data
alekseyzimin/ufasta
Utility to manipulate fasta files
alekseyzimin/wgs-8
alekseyzimin/xbmc
Kodi is an award-winning free and open source home theater/media center software and entertainment hub for digital media. With its beautiful interface and powerful skinning engine, it's available for Android, BSD, Linux, macOS, iOS and Windows.