alexenge/hu-neuro-pipeline

Issues

• Implement RIDE algorithm for speech artefact correction

  #177 opened 3 months ago by kirstenstark
  0

• Add MSEC/BESA matrices to ERP CORE download function

  #176 opened 5 months ago by alexenge
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• Use PyPI's "trusted publishers" for publishing instead of API token

  #174 opened 7 months ago by alexenge
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• Warn but continue if epochs selected with `average_by` is empty

  #171 opened 8 months ago by alexenge
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• Consider adding hu-neuro-pipeline to NITRC

  #170 opened 10 months ago by arnodelorme
  1

• In README, let users check if they already have (Mini)conda installed

  #117 opened 10 months ago by alexenge
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• Improve documentation

  #120 opened a year ago by alexenge
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• Epochs dropped as `'TOO_SHORT'` or `'NO_DATA'` cause log file merging errors

  #166 opened 10 months ago by alexenge
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• Coercion warning about `ica_n_components` is displayed even if it is already `int`

  #165 opened 10 months ago by alexenge
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• Error when saving special types (`Path`, `range`) to config

  #163 opened a year ago by alexenge
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• Error when `log_file` is a `.csv` file as a `pathlib.Path`

  #161 opened a year ago by alexenge
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• Fix error when `components['roi']` is not a nested list

  #159 opened a year ago by alexenge
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• Support `pathlib.Path` for input files and output directories

  #155 opened a year ago by alexenge
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• Allow more list-like types instead of just lists for some input arguments

  #156 opened a year ago by alexenge
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• Importing the pipeline errors with MNE version 1.6.0

  #153 opened a year ago by alexenge
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• Fix content of tables in Usage / Input arguments

  #123 opened a year ago by alexenge
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• MNE 1.5 has re-introduced the error when providing non-existing triggers

  #148 opened a year ago by alexenge
  1

• Make sure manifest files are installed with the package for fetchers

  #150 opened a year ago by alexenge
  0

• Improve dataset fetchers

  #145 opened a year ago by alexenge
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• Let users choose data path as an argument in UCAP / ERP CORE dataset fetchers

  #144 opened a year ago by alexenge
  1

• Change order of preprocessing steps to follow Steve Luck's suggestions

  #147 opened a year ago by alexenge
  1

• Allow options for EEG re-referencing

  #114 opened a year ago by alexenge
  0

• Allow users to keep channels that are not in the montage

  #141 opened a year ago by alexenge
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• Allow including/excluding trigger combinations instead of individual triggers

  #142 opened a year ago by alexenge
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• Epoch rejection fails if markers are present in the drop log of the epochs (e.g., `NO_DATA`)

  #139 opened a year ago by alexenge
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• Make sure that automatic matching via `triggers_column` works for non-BrainVision data

  #137 opened a year ago by alexenge
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• Allow setting `ica_n_components` to `None` and make it the new default

  #135 opened a year ago by alexenge
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• Move source files for documentation into separate `source/` sub-directory

  #133 opened a year ago by alexenge
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• Fix bug so that Read the Docs will render the examples again

  #131 opened a year ago by alexenge
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• Add ERP CORE example to docs

  #126 opened a year ago by alexenge
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• Re-factor dataset fetchers

  #128 opened a year ago by alexenge
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• Support processing of ERP CORE data

  #124 opened a year ago by alexenge
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• Add fetcher for the ERP CORE dataset(s)

  #121 opened a year ago by alexenge
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• Use `pick` method instead of `pick_channels` as it is now an MNE legacy function

  #118 opened a year ago by alexenge
  0

• Error at group level (grand averaging)

  #115 opened a year ago by kirstenstark
  0

• Don't convert mastoid/auricular channels to misc type

  #100 opened 2 years ago by alexenge
  1

• No results object created when `output_dir` has files from previous runs

  #110 opened a year ago by alexenge
  0

• Add instructions for installing development version from GitHub

  #105 opened 2 years ago by alexenge
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• Update lab name and website in README and elsewhere

  #112 opened 2 years ago by alexenge
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• Create evokeds based on custom filters

  #107 opened 2 years ago by alexenge
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• Description of (temporary) filter before ICA is wrong

  #108 opened 2 years ago by alexenge
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• When writing epochs, triggers shouldn't go into a column called `"condition"`

  #103 opened 2 years ago by alexenge
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• When passing data frames as `log_files` , config file may contain `NaN`s, which are invalid in JSON

  #101 opened 2 years ago by alexenge
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• Prettify console output

  #98 opened 2 years ago by alexenge
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• Allow more recent pandas versions

  #96 opened 2 years ago by alexenge
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• Add Python version to config

  #93 opened 2 years ago by alexenge
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• Write package versions to config

  #91 opened 2 years ago by alexenge
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• Error when one of the `triggers` is not in the data

  #88 opened 2 years ago by alexenge
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• Error when interpolating a single channel per subject in R

  #86 opened 2 years ago by alexenge
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• Interpolating channels from dict/list is broken

  #84 opened 2 years ago by alexenge
  0