alexgenin
Community Ecology, Interaction networks, Birds, Plants, R stuff, Stats, and the rest. Mastodon: @alexg@ecoevo.social
Utrecht University, NL; Pontificia Universidad Católica, CLFrance
Pinned Repositories
advent_of_code_2018
Advent of code in Julia (2018)
BayesianTools
General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
chouca
A probabilistic cellular automaton engine
clustsig
:exclamation: This is a read-only mirror of the CRAN R package repository. clustsig — Significant Cluster Analysis. Homepage: http://www.douglaswhitaker.com
coocfuncs
Tools to work with continuous plant transect data
econetmodel
Ecological networks modelling
fastcooc
Fast pairwise co-occurrence analysis for species presence/absence data
git_workshop
Slides from the git workshop (Oct 11 2018)
rollply
A rolling-window add-on to plyr
spatialwarnings
An R package to compute spatial early-warning signals of ecosystem degradation
alexgenin's Repositories
alexgenin/chouca
A probabilistic cellular automaton engine
alexgenin/rollply
A rolling-window add-on to plyr
alexgenin/fastcooc
Fast pairwise co-occurrence analysis for species presence/absence data
alexgenin/git_workshop
Slides from the git workshop (Oct 11 2018)
alexgenin/advent_of_code_2018
Advent of code in Julia (2018)
alexgenin/BayesianTools
General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
alexgenin/clustsig
:exclamation: This is a read-only mirror of the CRAN R package repository. clustsig — Significant Cluster Analysis. Homepage: http://www.douglaswhitaker.com
alexgenin/coocfuncs
Tools to work with continuous plant transect data
alexgenin/econetmodel
Ecological networks modelling
alexgenin/ggplot2
An implementation of the Grammar of Graphics in R
alexgenin/ifcam_output
Output (data and figures) for IFCAM project #1
alexgenin/miscutils
Misc helper functions for R
alexgenin/nerdchat_git
Resources and slides used during the git workshop
alexgenin/nti_modelling
Results of non-trophic interaction modelling
alexgenin/paspa-patterns
alexgenin/plyr
A R package for splitting, applying and combining large problems into simpler problems
alexgenin/poweRlaw
This package implements both the discrete and continuous maximum likelihood estimators for fitting the power-law distribution to data. Additionally, a goodness-of-fit based approach is used to estimate the lower cutoff for the scaling region.
alexgenin/presmaker
A simple presentation maker using bash + Inkscape
alexgenin/rigraph
igraph R package
alexgenin/spatialwarnings-paper
Manuscript for the spatialwarnings package
alexgenin/vegetation-dynamics
Investigating cluster dynamics in models of patchy ecosystems
alexgenin/wifi-connect
Easy WiFi setup for Linux devices from your mobile phone or laptop
alexgenin/workshops
Slides and resources for various workshops