Pinned Repositories
awesome-readme
A curated list of awesome READMEs
cryotracker
A cryoEM and cryoET viewer, database, and processing pipeline
jpeg_tomogram
Pack and unpack 3D MRC files to JPEG stacks for visualization to save space
PASR_python
This script applies the PASR algorithm to 2D images or image stacks.
STOPGAP
STOPGAP is a MATLAB-based package for subtomogram averaging.
teamtomo.github.io
A collaborative knowledge sharing platform for the cryo-ET community
topaz
Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples
appion-protomo
A Docker-based distribution of Appion-Protomo.
topaz
Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
teamtomo.github.io
A collaborative knowledge sharing platform for the cryo-ET community
alexjnoble's Repositories
alexjnoble/PASR_python
This script applies the PASR algorithm to 2D images or image stacks.
alexjnoble/awesome-readme
A curated list of awesome READMEs
alexjnoble/cryotracker
A cryoEM and cryoET viewer, database, and processing pipeline
alexjnoble/jpeg_tomogram
Pack and unpack 3D MRC files to JPEG stacks for visualization to save space
alexjnoble/STOPGAP
STOPGAP is a MATLAB-based package for subtomogram averaging.
alexjnoble/teamtomo.github.io
A collaborative knowledge sharing platform for the cryo-ET community
alexjnoble/topaz
Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples