alncat

alncat's Stars

• builab/subtomo2Chimera

  Language:Python182

• Nowosad/popgrids

  Global dataset of gridded population and GDP (1980-2010 estimations and 2020-2100 scenarios)

  Language:R191

• alisterburt/mdocspoofer

  spoof mdoc files from tomo5 frames directories

  Language:Python11

• sosnicklab/upside2-md

  Language:C++174

• sosnicklab/upside-md

  Coarse-grained molecular dynamics for protein physics. NOTE: this has been superseded by Upside 2: https://github.com/sosnicklab/upside2-md

  Language:C++204

• bpowell122/tomodrgn

  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms

  Language:Python191

• Matt00n/PolicyGradientsJax

  On-Policy Policy Gradient Algorithms in JAX

  Language:Python192

• NVlabs/edm2

  Analyzing and Improving the Training Dynamics of Diffusion Models (EDM2)

  Language:Python47419

• lucidrains/video-diffusion-pytorch

  Implementation of Video Diffusion Models, Jonathan Ho's new paper extending DDPMs to Video Generation - in Pytorch

  Language:Python1.2k122

• karpathy/llama2.c

  Inference Llama 2 in one file of pure C

  Language:C17.1k2k

• yang-song/score_sde_pytorch

  PyTorch implementation for Score-Based Generative Modeling through Stochastic Differential Equations (ICLR 2021, Oral)

  Language:Jupyter Notebook1.7k305

• yang-song/score_sde

  Official code for Score-Based Generative Modeling through Stochastic Differential Equations (ICLR 2021, Oral)

  Language:Jupyter Notebook1.4k195

• karpathy/llm.c

  LLM training in simple, raw C/CUDA

  Language:Cuda23.2k2.6k

• xai-org/grok-1

  Grok open release

  Language:Python49.4k8.3k

• lucidrains/memory-efficient-attention-pytorch

  Implementation of a memory efficient multi-head attention as proposed in the paper, "Self-attention Does Not Need O(n²) Memory"

  Language:Python35334

• salesforce/progen

  Official release of the ProGen models

  Language:Python602111

• openai/CLIP

  CLIP (Contrastive Language-Image Pretraining), Predict the most relevant text snippet given an image

  Language:Jupyter Notebook24.6k3.2k

• karpathy/minGPT

  A minimal PyTorch re-implementation of the OpenAI GPT (Generative Pretrained Transformer) training

  Language:Python19.8k2.5k

• NVIDIA/torch-harmonics

  Differentiable signal processing on the sphere for PyTorch

  Language:Jupyter Notebook35728

• scipion-em/scipion-em-opusdsd

  Plugin to use OPUS-DSD programs within the Scipion framework

  Language:Python2

• czimaginginstitute/AreTomo2

  Language:C++416

• google-research/fast-soft-sort

  Fast Differentiable Sorting and Ranking

  Language:Python56745

• OPUS-MaLab/opus_rota5

  OPUS-Rota5: A Highly Accurate Protein Side-chain Modeling Method with 3D-Unet and RotaFormer

  Language:Python32

• thuxugang/opus_fold3

  OPUS-Fold3: a gradient-based protein all-atom folding and docking framework on TensorFlow

  Language:Python33

• OPUS-MaLab/opus_fold3

  Language:Python42

• thuxugang/opus_rota5

  OPUS-Rota5: A Highly Accurate Protein Side-chain Modeling Method with 3D-Unet and RotaFormer

  Language:Python73

• SBC-Utrecht/PyTom

  PyTom software for cryo-tomogram processing

  Language:Python337

• SBC-Utrecht/pytom-match-pick

  GPU-accelerated template matching for cryo-ET

  Language:Python257

• turonova/cryoCAT

  Contextual Analysis Tools for cryoET and subtomogram averaging

  Language:Jupyter Notebook182

• EuanPyle/relion4_tomo_robot

  Automated workflow for preparing tilt series data for RELION 4.0.

  Language:MATLAB141