althornt

althornt's Stars

• dviraran/xCell

  Cell types enrichment analysis

  Language:HTML19062

• cxli233/Online_R_learning

  Online R learning for applied statistics

  537105

• cxli233/FriendsDontLetFriends

  Friends don't let friends make certain types of data visualization - What are they and why are they bad.

  Language:R6.5k253

• broadinstitute/ssGSEA2.0

  Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

  Language:R25779

• pachterlab/gget

  🧬 gget enables efficient querying of genomic reference databases

  Language:Python95975

• PoisonAlien/trackplot

  Generate IGV style locus tracks from bigWig files in R

  Language:R14818

• UCSC-Daniel-Kim-Lab/bioconductor_docker

  Docker Containers for Bioconductor - NEW!

  Language:Dockerfile1

• pachterlab/ffq

  A tool to find sequencing data and metadata from public databases.

  Language:Python55647

• deeptools/pyBigWig

  A python extension for quick access to bigWig and bigBed files

  Language:C22150

• rougier/scientific-visualization-book

  An open access book on scientific visualization using python and matplotlib

  Language:Python10.8k992

• duerrsimon/bioicons

  A library of free open source icons for science illustrations in biology and chemistry

  Language:Vue1.4k78

• seankross/postcards

  💌 Create simple, beautiful personal websites and landing pages using only R Markdown.

  Language:HTML55387

• web4bio/webgen

  WebGen Vertically Integrated Project

  Language:JavaScript1126

• omnideconv/immunedeconv

  A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

  Language:R471101

• Nyandwi/machine_learning_complete

  A comprehensive machine learning repository containing 30+ notebooks on different concepts, algorithms and techniques.

  Language:Jupyter Notebook4.7k770

• icgc-argo/wfpm

  WorkFlow Package Manager

  Language:Python92

• ibraheemdev/modern-unix

  A collection of modern/faster/saner alternatives to common unix commands.

  31.3k789

• shaggyfeng/obsidian-Pink-topaz-theme

  Pink Topaz theme for Obsidian.

  Language:CSS225

• nextflow-io/rnaseq-nf

  A proof of concept of RNAseq pipeline

  Language:Nextflow74104

• mgmeyers/obsidian-kanban

  Create markdown-backed Kanban boards in Obsidian.

  Language:TypeScript3.3k195

• reactive-python/reactpy

  It's React, but in Python

  Language:Python7.9k318

• javalent/admonitions

  Adds admonition block-styled content to Obsidian.md

  Language:TypeScript1.1k75

• open-guides/og-aws

  📙 Amazon Web Services — a practical guide

  Language:Shell35.8k3.9k

• crazyhottommy/getting-started-with-genomics-tools-and-resources

  Unix, R and python tools for genomics and data science

  Language:Shell1.2k351

• webermarcolivier/statannot

  add statistical annotations (pvalue significance) on an existing boxplot generated by seaborn boxplot

  Language:Jupyter Notebook39674

• rsalmei/alive-progress

  A new kind of Progress Bar, with real-time throughput, ETA, and very cool animations!

  Language:Python5.6k210

• ivan-lednev/obsidian-day-planner

  An Obsidian plugin for day planning with a clean UI and a simple task format

  Language:TypeScript2.2k498

• ericmjl/Network-Analysis-Made-Simple

  An introduction to network analysis and applied graph theory using Python and NetworkX

  Language:Jupyter Notebook1k401

• slowkow/snakefiles

  :snake: Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).

  Language:Python9136

• pbnjay/lollipops

  This is the development fork - Stable code has been moved to ==>

  Language:Go229