amizeranschi

Pinned Repositories

bcbio-nextgen-ui
Usability improvements for the Bcbio-nextgen data analysis pipeline.
Language:HTML0 1 00
GAPIT
Genome Association Predict Integrate Tools
Language:R00
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Language:Python994 86 3.1k353
bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell1.7k 96 1.9k3.3k
ensembl-vep
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
Language:Perl462 29 1.1k155
phangorn
Phylogenetic analysis in R
Language:R206 11 14339
funcscan
(Meta-)genome screening for functional and natural product gene sequences
Language:Nextflow77 99 15322
mag
Assembly and binning of metagenomes
Language:Nextflow223 161 307114
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
Language:Nextflow288 227 1.8k736
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Language:Nextflow413 135 731420

amizeranschi's Repositories

amizeranschi/bcbio-nextgen-ui
Usability improvements for the Bcbio-nextgen data analysis pipeline.
Language:HTML0 1 00
amizeranschi/GAPIT
Genome Association Predict Integrate Tools
Language:R00