bioconda/bioconda-recipes

Issues

• svn in requirements-> build leads to errors: svn does not exist

  #48352 opened 2 days ago by PatschD
  1

• Upgrade `entrez-direct`

  #48279 opened 4 days ago by bounlu
  0

• Improve docker testing recommendations

  #48296 opened 4 days ago by corneliusroemer
  0

• Docker images only built for linux-64 per description in PRs, we should now also mention/build/test linux-aarch64

  #48295 opened 4 days ago by corneliusroemer
  0

• CI Azure Pipeline connectivity issue?

  #48025 opened 5 days ago by acarafat
  2

• Azure test fails with memory error

  #48226 opened 5 days ago by npbhavya
  1

• A small suggestion on submission mechanism of recipes

  #48237 opened 6 days ago by ZhijianZhou01
  2

• Azure test get cancelled

  #48091 opened 13 days ago by wxicu
  4

• Illegal instruction (core dumped) for vcfstats in vcflib 1.0.9

  #48149 opened 11 days ago by kathoef
  0

• conda-build mulled-build fails: UnsatisfiableError __glibc

  #47862 opened 11 days ago by gregdenay
  2

• drop 1.3.4 build fails after merging: downloaded artifact not a zip file

  #48129 opened 12 days ago by AtaJadidAhari
  2

• Updating recipes via `autobump` failed.

  #47929 opened 22 days ago by akikuno
  1

• Azure Pipelines error with "No hosted parallelism has been purchased"

  #47856 opened 22 days ago by TobyBaril
  4

• CTAT-Splicing

  #47890 opened 25 days ago by micknudsen
  1

• Bioconda CDN sync >2hr behind

  #47853 opened 25 days ago by corneliusroemer
  0

• problem installing getorganelle

  #47840 opened a month ago by phoebehagberg
  1

• trouble in Azure DevOps test

  #47547 opened a month ago by yanyew
  11

• glmmTMB Package version inconsistency detected while updating Maaslin2 version to 1.16.0

  #47668 opened a month ago by renu-pal
  1

• CircleCI Artifact Fetching Failing for linux-aarch64

  #47663 opened a month ago by aliciaaevans
  0

• Issues with mulled-build after successful conda build

  #47554 opened a month ago by TobyBaril
  2

• hmmer aspired to update

  #47526 opened a month ago by 0x1orz
  1

• Upgrade log4j-1.2.8 to log4j-2.x PLEASE!!!

  #46980 opened a month ago by msukhanson
  4

• aarch64 svtools dependencies

  #47350 opened 2 months ago by cghAshes
  3

• Using `bioconductor-data-packages` behind proxy

  #47347 opened 2 months ago by votti
  0

• no image on quay.io for robust_bias_aware

  #46769 opened 2 months ago by lspindler2509
  2

• Memory corruption using bioconda::samtools + miniforge

  #47137 opened 2 months ago by jmunoz94
  4

• Bioperl is not installed in the correct path

  #47246 opened 2 months ago by KristinaGagalova
  2

• Old version of samtools was installed by conda

  #47197 opened 2 months ago by FionaMoon
  1

• Can't find most bioconda packages using conda or mamba/micromamba

  #47025 opened 2 months ago by pmomadeira
  1

• pairix requires Perl for utilities

  #46957 opened 2 months ago by adthrasher
  3

• make: g++: No such file or directory

  #47103 opened 2 months ago by wshuai294
  4

• The dependent version specified in the meta.yaml file was installed with a different version during installation

  #47094 opened 2 months ago by dingronghua
  1

• cnv_facets fails to build

  #46927 opened 2 months ago by stianlagstad
  1

• Issue with versions - GMM-Demux

  #46523 opened 2 months ago by mari-ga
  1

• current salmon (v1.10.2-0) install conflicts

  #46306 opened 3 months ago by cmeesters
  3

• rgi v6.0.3 needs pyrodigal < 3

  #46581 opened 2 months ago by danpal96
  1

• prokbert autointegration failed

  #45810 opened 3 months ago by obalasz
  1

• checkqc: InterOp is not installed in docker image

  #46558 opened 3 months ago by matrulda
  6

• LJA container fails: "Child process crashed"

  #46572 opened 3 months ago by MrTomRod
  0

• vcfstreamsort: error while loading shared libraries: libtabixpp.so.0: cannot open shared object file: No such file or directory vcfuniq: error while loading shared libraries: libtabixpp.so.0: cannot open shared object file: No such file or directory

  #46114 opened 3 months ago by shangguan77
  2

• Add dependency `interproscan` to `sanntis` recipe

  #46396 opened 3 months ago by jasmezz
  2

• Run `build-linux` and `build-osx` in parallel?

  #46294 opened 3 months ago by niemasd
  1

• Different glibc version between aarch64 and x86 builders?

  #46186 opened 3 months ago by corneliusroemer
  5

• bioconductor-data-package: is `yq` necessary?

  #46366 opened 3 months ago by hexylena
  0

• viral_consensus v0.0.5 autobump ran into compile error

  #46253 opened 3 months ago by niemasd
  6

• Bioconda packages not downloading on Mac M3

  #45948 opened 4 months ago by faleevz
  2

• bknn's numpy pinnings are incompatible with current scanpy 1.9.8

  #45942 opened 4 months ago by pcm32
  0

• update samtools

  #45883 opened 4 months ago by wcarre
  2

• Java runtime dependences and impacts

  #45812 opened 4 months ago by jfouret
  0

• kallisto 0.50.1 fails with "Illegal instruction" when built on machines with AVX-512

  #45793 opened 4 months ago by stianlagstad
  1