niemasd

Niema Moshiri, Associate Teaching Professor of Computer Science, UC San Diego

University of California, San DiegoSan Diego, CA, USA

Pinned Repositories

FAVITES
FAVITES (FrAmework for VIral Transmission and Evolution Simulation)
Language:Python38 5 444
FAVITES-Lite
FAVITES-Lite: A lightweight framework for viral transmission and evolution simulation
Language:Python7 1 126
GameDB
Niema's databases for games from various consoles
Language:Python17 1 00
How-to-Teach-Online
An online training module to provide instructors guidance in developing and offering fully-online and hybrid courses
Language:TeX1 0 11
Learn-Programming-Python-Source
Source code for Learn Programming: Python
Language:Python29 3 04
MemCard-PRO-Renamer
Convert MemCard PRO folders to/from human-readable names
Language:Python27 2 10
TreeCluster
Efficient phylogenetic clustering of viral sequences
Language:Python81 3 1010
TreeSwift
TreeSwift: Fast tree module for Python 3
Language:Python79 3 2616
ViralConsensus
Fast viral consensus genome reconstruction
Language:C++22 2 83
ViralMSA
Reference-guided multiple sequence alignment of viral genomes
Language:Python65 2 3710

niemasd's Repositories

niemasd/TreeSwift
TreeSwift: Fast tree module for Python 3
Language:Python79 3 2616
niemasd/ViralMSA
Reference-guided multiple sequence alignment of viral genomes
Language:Python65 2 3710
niemasd/ViralConsensus
Fast viral consensus genome reconstruction
Language:C++22 2 83
niemasd/GameDB
Niema's databases for games from various consoles
Language:Python17 1 00
niemasd/teaching
My teaching resources
Language:Python15 0 37
niemasd/CompactTree
Lightweight header-only C++ library for loading and traversing trees
Language:C++14 1 9
niemasd/MESS
MESS: Moshiri Exam Similarity Score
Language:Python14 3 00
niemasd/GameID
Identify a game using GameDB
Language:Python13 4 131
niemasd/curriculum-vitae
Niema Moshiri's Curriculum Vitae (CV)
Language:TeX3 1 01
niemasd/FAVITES-ABM-HIV-SD-Lite
A simplified simulation pipeline specifically for ABM-HIV SD
Language:Python3 1 32
niemasd/Game-Saves
My backups of game saves
3 1 0
niemasd/CompactTree-Paper
Repository to store data/figures for CompactTree paper
Language:Python2 1 0
niemasd/MultiVirusConsensus
Fast consensus genome reconstruction of multiple viruses from a mixed sample
Language:Python2
niemasd/R36S-Bioinformatics
A suite of Bioinformatics tools for the R36S
Language:Python2 1 0
niemasd/Bluesky-Tools
Niema's Bluesky Tools
Language:Python1 1 0
niemasd/chdman_helper
Helper script for batch chdman jobs
Language:Python1 1 1
niemasd/Delete-Tweets-Backup
Language:JavaScript1 1 0
niemasd/Game-Catalog-Tools
Niema's collection of tools related to game catalogs (e.g. No-Intro and Redump)
Language:Python1 1 0
niemasd/History-of-Video-Games
Open Educational Resource (OER) about the history of video games
Language:TeX1
niemasd/hivtrace-true-append
Code related to HIV-TRACE "True Append"
Language:Python1 1 1
niemasd/How-to-Teach-Online
An online training module to provide instructors guidance in developing and offering fully-online and hybrid courses
Language:TeX1 0 11
niemasd/Karen-s-Cookbook
Karen's Cookbook
Language:TeX1 1 0
niemasd/Niema-Twitter-Blocks
An archive of Niema's Twitter blocks
Language:Python1 0 0
niemasd/niemasd.github.io
Niema Moshiri's website
Language:HTML1 0 0
niemasd/SC2-Deletion-Analysis
Language:Jupyter Notebook1 1 0
niemasd/SteamAchievementManager
A manager for game achievements in Steam.
Language:C#1 0 0
niemasd/Big-Ass-Data-Broker-Opt-Out-List
niemasd/GraphvizOnline
Let's Graphviz it online
Language:JavaScript0 0
niemasd/R36S-Bioinformatics-Paper
Repository to store data/figures for R36S-Bioinformatics paper
1 0
niemasd/tn93
TN93 fast distance calculator
Language:C++0 0