niemasd
Niema Moshiri, Associate Teaching Professor of Computer Science, UC San Diego
University of California, San DiegoSan Diego, CA, USA
Pinned Repositories
FAVITES
FAVITES (FrAmework for VIral Transmission and Evolution Simulation)
FAVITES-Lite
FAVITES-Lite: A lightweight framework for viral transmission and evolution simulation
GameDB
Niema's databases for games from various consoles
How-to-Teach-Online
An online training module to provide instructors guidance in developing and offering fully-online and hybrid courses
Learn-Programming-Python-Source
Source code for Learn Programming: Python
MemCard-PRO-Renamer
Convert MemCard PRO folders to/from human-readable names
TreeCluster
Efficient phylogenetic clustering of viral sequences
TreeSwift
TreeSwift: Fast tree module for Python 3
ViralConsensus
Fast viral consensus genome reconstruction
ViralMSA
Reference-guided multiple sequence alignment of viral genomes
niemasd's Repositories
niemasd/TreeSwift
TreeSwift: Fast tree module for Python 3
niemasd/ViralMSA
Reference-guided multiple sequence alignment of viral genomes
niemasd/ViralConsensus
Fast viral consensus genome reconstruction
niemasd/GameDB
Niema's databases for games from various consoles
niemasd/teaching
My teaching resources
niemasd/CompactTree
Lightweight header-only C++ library for loading and traversing trees
niemasd/MESS
MESS: Moshiri Exam Similarity Score
niemasd/GameID
Identify a game using GameDB
niemasd/curriculum-vitae
Niema Moshiri's Curriculum Vitae (CV)
niemasd/FAVITES-ABM-HIV-SD-Lite
A simplified simulation pipeline specifically for ABM-HIV SD
niemasd/Game-Saves
My backups of game saves
niemasd/CompactTree-Paper
Repository to store data/figures for CompactTree paper
niemasd/MultiVirusConsensus
Fast consensus genome reconstruction of multiple viruses from a mixed sample
niemasd/R36S-Bioinformatics
A suite of Bioinformatics tools for the R36S
niemasd/Bluesky-Tools
Niema's Bluesky Tools
niemasd/chdman_helper
Helper script for batch chdman jobs
niemasd/Delete-Tweets-Backup
niemasd/Game-Catalog-Tools
Niema's collection of tools related to game catalogs (e.g. No-Intro and Redump)
niemasd/History-of-Video-Games
Open Educational Resource (OER) about the history of video games
niemasd/hivtrace-true-append
Code related to HIV-TRACE "True Append"
niemasd/How-to-Teach-Online
An online training module to provide instructors guidance in developing and offering fully-online and hybrid courses
niemasd/Karen-s-Cookbook
Karen's Cookbook
niemasd/Niema-Twitter-Blocks
An archive of Niema's Twitter blocks
niemasd/niemasd.github.io
Niema Moshiri's website
niemasd/SC2-Deletion-Analysis
niemasd/SteamAchievementManager
A manager for game achievements in Steam.
niemasd/Big-Ass-Data-Broker-Opt-Out-List
niemasd/GraphvizOnline
Let's Graphviz it online
niemasd/R36S-Bioinformatics-Paper
Repository to store data/figures for R36S-Bioinformatics paper
niemasd/tn93
TN93 fast distance calculator