Feature request - accept .fa.gz input files
haiqu opened this issue · 2 comments
haiqu commented
Seems strange to need extracted .fa files as input when reference genomes are distributed as .fa.gz files, and since the capability is already in the code this should be trivial to implement.
bolosky commented
Yes, we should do this.
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Subject: [amplab/snap] Feature request - accept .fa.gz input files (#132)
Seems strange to need extracted .fa files as input when reference genomes are distributed as .fa.gz files, and since the capability is already in the code this should be trivial to implement.
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bolosky commented
This is done in 2.0.1. As you might imagine, it wasn't as easy as it seemed, or we would have done it earlier.