andrewjpage/tiptoft

Issues

• Error downloading database

  #28 opened 2 years ago by Niicii
  2

• Error downloading database

  #26 opened 5 years ago by samlipworth
  2

• Usage question

  #25 opened 6 years ago by conte1
  1

• add CONTRIBUTING.md?

  #19 opened 6 years ago by ctb
  1

• cannot find example data file

  #18 opened 6 years ago by ctb
  1

• create a CITATION file and add plasmidFinder to it?

  #17 opened 6 years ago by ctb
  1

• [JOSS-review] Please remember to cite the plasmidFinder paper

  #16 opened 6 years ago by azneto
  1

• Successfully installed tiptoft-x.y.z ?

  #13 opened 6 years ago by tseemann
  1

• ValueError: 'homopolymer_compression.pyx' doesn't match any files

  #11 opened 6 years ago by tseemann
  2

• Add 3.7-dev test

  #12 opened 6 years ago by tseemann
  1

• Consider homopolymer compressed kmers

  #7 opened 6 years ago by tseemann
  4

• 0.0.3 crash - TypeError: get_one_x_coverage_of_kmers() missing 3 required positional arguments: 'sequence', 'k', and 'end'

  #8 opened 6 years ago by tseemann
  1

• Author's github photo needs cheering up

  #5 opened 7 years ago by tseemann
  0

• -o FILE does not create FILE

  #2 opened 7 years ago by tseemann
  1

• Best parameters for pacbio reads?

  #3 opened 7 years ago by tseemann
  2

• Interpreting the output

  #4 opened 7 years ago by tseemann
  1

• Default to include data/ files?

  #1 opened 7 years ago by tseemann
  1

• plasmidpredictor_database_downloader shouldn't download surprisingly

  #6 opened 7 years ago by tseemann
  1