/mr-mpi-blast

Parallel implementation of NCBI BLAST+ with MapReduce-MPI

Primary LanguageShellOtherNOASSERTION

README


Updated: 1/27/2012
By Seung-Jin Sul (ssul@jcvi.org)


This is introductory README for the mr-mpi-blast program. For details, you may 
refer the below documents:

  - doc/HOWTOBUILD: explains how to build mr-mpi-blast 
  - doc/USERGUIDE: introduces mr-mpi-blast program and how to run mr-mpi-blast and set parameters
  - tutorial/README: introduces how to run mr-mpi-blast on the XSEDE TACC Ranger cluster
  - examples/test/generic-test/README: introduces how to run mr-mpi-blast on a local machine
  - examples/test/classifier-test/README: introduces how to run mr-mpi-blast on a local machine with classifier output 
  - examples/refseq-all-vs-all/README: introduces an example of large-scale experiment