Pinned Repositories
aconr
andreyto.github.com
GitHub User Web page
anrepr
Analysis Reporting in R as a Hierarchical Graphical Logging
arcasHLA-quant
Fork of roseorenbuch/arcasHLA-quant for making bug fixes
at-fork-cctools
This is a fork of The Cooperative Computing Tools (cctools) enable large scale distributed computations to harness hundreds to thousands of machines from clusters, clouds, and grids.
atac-seq-pipeline
Fork of ENCODE ATAC-seq WDL pipeline for making patches
mgtaxa
A free software for taxonomic classification of metagenomic sequences with machine learning techniques
mr-mpi-blast
Parallel implementation of NCBI BLAST+ with MapReduce-MPI
mr-mpi-som
Parallel implementation of Self-Organizing Map (SOM) algorithm with MapReduce-MPI
YAP
Development of the JCVI fork of YAP 16S pipeline continued here
andreyto's Repositories
andreyto/mr-mpi-som
Parallel implementation of Self-Organizing Map (SOM) algorithm with MapReduce-MPI
andreyto/mgtaxa
A free software for taxonomic classification of metagenomic sequences with machine learning techniques
andreyto/mr-mpi-blast
Parallel implementation of NCBI BLAST+ with MapReduce-MPI
andreyto/andreyto.github.com
GitHub User Web page
andreyto/YAP
Development of the JCVI fork of YAP 16S pipeline continued here
andreyto/aconr
andreyto/anrepr
Analysis Reporting in R as a Hierarchical Graphical Logging
andreyto/arcasHLA-quant
Fork of roseorenbuch/arcasHLA-quant for making bug fixes
andreyto/at-fork-cctools
This is a fork of The Cooperative Computing Tools (cctools) enable large scale distributed computations to harness hundreds to thousands of machines from clusters, clouds, and grids.
andreyto/atac-seq-pipeline
Fork of ENCODE ATAC-seq WDL pipeline for making patches
andreyto/BugBuilder
Hands-free microbial genome assembly
andreyto/conda-recipes
Fork of main conda recipes repository for submitting patches
andreyto/doRedis
R/foreach Redis backend for parallel computing
andreyto/galaxy
Fork of main Galaxy repo for making patches
andreyto/galaxy_r_api_workshop
Tutorial for accessing Galaxy bioinformatics workbench API from R using parsec CLI and providing dependencies for the R-based Galaxy tools as Docker containers
andreyto/GeneSelector
Fork of Bioconductor GeneSelector repository for patching
andreyto/homebrew
:beer: The missing package manager for OS X.
andreyto/mgsat
MGSAT semi-automated differential abundance analysis of omics datasets
andreyto/mgsat-examples
Example reports generated by MGSAT
andreyto/micgent
Old location of MICGENT repository
andreyto/pgp-par
PGP: Parallel Proteogenomics Pipeline for MPI clusters, high-throughput batch clusters and multicore workstations
andreyto/proddl-c
Client-cloud self-scaling computational backend and user API for MS Azure
andreyto/proddl2
Protein Docking with Discriminative Learning v.2
andreyto/pVACtools
Fork of pVACtools for bug fixes
andreyto/rsv_epi_2017_suppl
Supplemental code and reference data for RSV epidemiology analysis
andreyto/rthreejs
Fork of rthreejs for making patches
andreyto/srst2
Fork of SRST2 repository for making changes
andreyto/stabs
Fork of stabs repository for bug fixing
andreyto/VICVB
Genome browsing with JBrowse for JCVI VIGOR output inside Galaxy