animesh
A medical graduate from Delhi University with post-graduation in bioinformatics from Jawaharlal Nehru University, India.
Norwegian University of Science and TechnologyNorway
Pinned Repositories
2022_asms-ml-short-course
Links and meterials for the 2022 ASMS machine learning short course.
2023
2023-nr-clustering
Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.
aniplay
Automatically exported from code.google.com/p/aniplay
clock-ticker
Automatically exported from code.google.com/p/clock-ticker
misccb
Automatically exported from code.google.com/p/misccb
public-html-ani
Automatically exported from code.google.com/p/public-html-ani
scripts
Miscellaneous scripts moved from https://code.google.com/p/misccb/
Sentiment-Analysis-On-Hindi-Reviews
We have used 250 sentences of movie reviews available for research from IIT bombay and also crawled and manually annotated 750 reviews from jagran.com, In total 1000 reviews. After preprocessing the dataset, We generate the featureset as a vector-based approach using Term frequency, tfidf for unigrams and bigrams. Then we used three approaches to predict the sentiment of a review. Approaches used are Resource based, In-language semantic analysis and Machine Translation based semantic analysis.
vscode-selected-character-count
created to count number of sequences in fasta file
animesh's Repositories
animesh/AgentClinic
Agent benchmark for medical diagnosis
animesh/AI-Scientist
The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery 🧑🔬
animesh/aider
aider is AI pair programming in your terminal
animesh/cancer-variants-training
animesh/ClassificationThresholdTuner
Tool to set the thresholds for classification problems and to visualize the implications of potential thresholds.
animesh/codespaces-models
animesh/DataScienceInteractivePython
Python interactive dashboards for learning data science
animesh/ELIXIR-SCO-spatial-omics
animesh/FASTGA
Pairwise whole genome aligner
animesh/flexynesis
A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner
animesh/foldmason
Multiple Protein Structure Alignment at Scale with FoldMason
animesh/GageTracker
tool for dating gene age by micro- and macro-synteny with high speed and accuracy
animesh/graphql-hooks-workshop
animesh/GSE_95077
Analysis for "Amiloride, an old diuretic drug, is a potential therapeutic agent for multiple myeloma"
animesh/ISMARA-upload
Upload client for the ISMARA web-service (www.ismara.unibas.ch)
animesh/liana-py
LIANA+: an all-in-one framework for cell-cell communication
animesh/LongWriter
LongWriter: Unleashing 10,000+ Word Generation from Long Context LLMs
animesh/nf-core-demo
animesh/pairwise-ranking
Python package for pairwise ranking
animesh/PLTNUM
animesh/prophet
animesh/ProteomicsEducation
animesh/python-file-analyzer
A simple utility script which allows you to analyze your python file
animesh/Quantile-Regression-using-Random-Forest-Proximities
A basic DIY Implementation of Quantile Regression using Random Forest Proximities
animesh/QuantQC
QuantQC is a package for quality control (QC) of single-cell proteomics data. It is optimized to work with nPOP, a method for massively parallel sample preparation on glass slides.
animesh/rl_book
animesh/ropebwt3
BWT construction and search
animesh/S2IsoMEr
Spatial and Single cell Isomeric Metabolite enrichment in R
animesh/tensorgrad
Tensor Network Library with Autograd
animesh/transformer-explainer
Transformer Explained: Learn How LLM Transformer Models Work with Interactive Visualization