animesh

2022_asms-ml-short-course

Links and meterials for the 2022 ASMS machine learning short course.

2023

2023-nr-clustering

Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.

aniplay

Automatically exported from code.google.com/p/aniplay

clock-ticker

Automatically exported from code.google.com/p/clock-ticker

misccb

Automatically exported from code.google.com/p/misccb

public-html-ani

Automatically exported from code.google.com/p/public-html-ani

scripts

Miscellaneous scripts moved from https://code.google.com/p/misccb/

Sentiment-Analysis-On-Hindi-Reviews

We have used 250 sentences of movie reviews available for research from IIT bombay and also crawled and manually annotated 750 reviews from jagran.com, In total 1000 reviews. After preprocessing the dataset, We generate the featureset as a vector-based approach using Term frequency, tfidf for unigrams and bigrams. Then we used three approaches to predict the sentiment of a review. Approaches used are Resource based, In-language semantic analysis and Machine Translation based semantic analysis.

vscode-selected-character-count

created to count number of sequences in fasta file

animesh/vscode-selected-character-count

created to count number of sequences in fasta file

animesh/2024-potus

repo for constructing a 2024 presidential election forecast

animesh/alga

CLI for remote controlling LG webOS TVs

animesh/alpharaw

An open-source Python package to unify raw MS data accession and storage.

animesh/audioseal

Localized watermarking for AI-generated speech audios, with SOTA on robustness and very fast detector

animesh/awesome-datascience

:memo: An awesome Data Science repository to learn and apply for real world problems.

animesh/compbio-juliacon-2024

Julia for Systems Biology Workshop @JuliaCon 2024

animesh/CountsOutlierDetector

Interpretable, intuitive outlier detector intended for categorical and numeric data.

animesh/cubff

animesh/CVD-paper-mobile-camera-example

animesh/data-science-2

:bar_chart: Path to a free self-taught education in Data Science!

animesh/Data-Science-For-Beginners

10 Weeks, 20 Lessons, Data Science for All!

animesh/data-science-interviews

Data science interview questions and answers

animesh/differentiable-brain-modeling-workflow

A differentiable approach to multi-scale brain modeling.

animesh/generative-ai-for-beginners

18 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/

animesh/GML2023

Graph Machine Learning course, Xavier Bresson, 2023

animesh/grokfast

Official repository for the paper "Grokfast: Accelerated Grokking by Amplifying Slow Gradients"

animesh/hand-written-digits-classification

This repository provides step-by-step guides to create a powerful model capable of recognizing handwritten digits.

animesh/idx

animesh/latentshift

animesh/marginaleffects

R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and ML models. Conduct linear and non-linear hypothesis tests, or equivalence tests. Calculate uncertainty estimates using the delta method, bootstrapping, or simulation-based inference

animesh/mzxml-precursor-corrector

animesh/patho

animesh/Prompt-DDG

Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical Prompt Learning"

animesh/PythonDataScienceHandbook

Python Data Science Handbook: full text in Jupyter Notebooks

animesh/single-cell-proteomics

Single cell proteomics data processing

animesh/Synthetic-data-generation

Simulated Data Generation for Data Science and Machine Learning

animesh/tika

animesh/VIB_Hackathon_June_2024

Code repository for the VIB Hackathon June 2024 on spatial omics. More info: https://hackmd.io/@berombau/BJetSxw8T

animesh/WENDY

code files for WENDY method