Pinned Repositories
episystem-workshop
Markdown files for episystem workshop
freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
humanGastruloids_tomoseq
In this repository we share the notebooks used to perform the analysis of tomo-seqqed human gastruloids.
mouseGastruloids_scRNAseq_tomoseq
Collection of scripts used to perform the analysis
reveal.js
The HTML Presentation Framework
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
scScarTrace
StemID
transcriptomics
basic transcriptomic analysis
VASAseq
Collections of scripts used to map and analyze VASAseq data
anna-alemany's Repositories
anna-alemany/VASAseq
Collections of scripts used to map and analyze VASAseq data
anna-alemany/mouseGastruloids_scRNAseq_tomoseq
Collection of scripts used to perform the analysis
anna-alemany/scScarTrace
anna-alemany/humanGastruloids_tomoseq
In this repository we share the notebooks used to perform the analysis of tomo-seqqed human gastruloids.
anna-alemany/transcriptomics
basic transcriptomic analysis
anna-alemany/reveal.js
The HTML Presentation Framework
anna-alemany/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
anna-alemany/StemID
anna-alemany/episystem-workshop
Markdown files for episystem workshop
anna-alemany/freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
anna-alemany/MGcount
MGcount github repository
anna-alemany/pyRaceID
RaceID in python
anna-alemany/rollDice
A glimpse in the organization of python projects. Personal choice, might not be the best one!
anna-alemany/RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
anna-alemany/singleMolecule
set of scripts to perform single molecule force spectrosocpy analysis (optical tweezers setup)
anna-alemany/test-repo
testing
anna-alemany/TrackerSeq_BROs
Analysis of trackerseq data in Brain Organoids