FILTER and INFO fields

Question

Opened this issue 6 years ago · 2 comments

Hello,
it seems clairvoyante tends not to fill those 2 filters. Is it the expected behaviour?

A_Seg296	7630007	.	A	C	999	.	.	GT:GQ:DP:AF	0/1:999:354:0.4972
A_Seg296	7630172	.	AC	A	999	.	.	GT:GQ:DP:AF	0/1:999:299:0.5485

Or does it mean Clairvoyante did not understand what kind of variant those are?
Thank you

Answer 1 · 2019-04-02T01:45:01.000Z

Those two fields could be filled by post-procession tools, such as filtration, etc.

Answer 2 · 2019-04-02T13:05:49.000Z

Thanks! was just double checking