arefeen/TAPAS

Issues

• Diff_APA_site_analysis cannot start

  #22 opened 5 months ago by Jamtai
  0

• TAPAS on GTF from Gencode v28

  #6 opened 5 years ago by JamalEH
  5

• problem with APA_sites_detection

  #21 opened 2 years ago by haojin9288
  1

• Issues about Diff_APA_site_analysis

  #13 opened 4 years ago by maximumko
  6

• Differential APA site analysis doesn't start

  #3 opened 6 years ago by OSchwich
  9

• APA site reported in the results file

  #11 opened 5 years ago by JamalEH
  6

• "No file with name diff_result.txt"

  #20 opened 3 years ago by eboone1001
  0

• APA site detection beyond the 3'-UTR?

  #19 opened 3 years ago by lennartraman
  4

• The sorted and filtered refFlat file was generated as a blank file

  #18 opened 4 years ago by ShenTTT
  2

• Using TAPAS with custom annotations

  #2 opened 6 years ago by jankgithub
  4

• Interpretation results output

  #17 opened 4 years ago by sopenaml
  0

• memory allocation issues when runnning Diff_APA_site_analysis

  #16 opened 4 years ago by sopenaml
  0

• Get the sequence of the APA sites

  #15 opened 4 years ago by maxjordanduarte
  0

• Analysis steps for ground truth APA in MAQC PolyA-seq data from Arefeen et al 2018?

  #14 opened 4 years ago by rbatorsky
  3

• How to create shared code installation and run TAPAS from outside code directory?

  #12 opened 4 years ago by rbatorsky
  1

• Differential APA analysis - shortening/lengthening event analysis

  #7 opened 5 years ago by SMM02
  6

• -cutoff option

  #10 opened 5 years ago by JamalEH
  0

• Need help for results interpretation

  #9 opened 5 years ago by JamalEH
  0

• Samtools or deptools

  #8 opened 5 years ago by JamalEH
  2

• GRCh38 annotation

  #5 opened 5 years ago by AlanMonziani
  1

• Source code for binaries

  #4 opened 6 years ago by khoegenauer
  1

• TAPAS with mouse genome

  #1 opened 6 years ago by rikaiese
  1