rbatorsky

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bioinformatics-rnaseq

tufts workshop

covid-placenta-edlow

Maternal SARS-CoV-2 impacts fetal placental macrophage programs and placenta-derived microglial models of neurodevelopment

fetal-mac-edlow

hiv-recombination

Code for simulation of hiv evolution under selection, mutation and recombination.

intro-to-galaxy-ngs-sarscov2

https://rbatorsky.github.io/intro-to-galaxy-ngs-sarscov2/

intro-to-ngs-bioinformatics

A Tufts University Research Technology Workshop

intro-to-rnaseq-with-galaxy

https://rbatorsky.github.io/intro-to-rnaseq-with-galaxy/

roi_validation

script to validate bmf and immunology roi variant sets that are loaded into nextcode

singularity-recipes

rbatorsky/intro-to-ngs-bioinformatics

A Tufts University Research Technology Workshop

rbatorsky/bioinformatics-rnaseq

tufts workshop

rbatorsky/intro-to-galaxy-ngs-sarscov2

https://rbatorsky.github.io/intro-to-galaxy-ngs-sarscov2/

rbatorsky/bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

rbatorsky/covid-placenta-edlow

Maternal SARS-CoV-2 impacts fetal placental macrophage programs and placenta-derived microglial models of neurodevelopment

rbatorsky/fetal-mac-edlow

rbatorsky/hiv-recombination

Code for simulation of hiv evolution under selection, mutation and recombination.

rbatorsky/intro-to-rnaseq-with-galaxy

https://rbatorsky.github.io/intro-to-rnaseq-with-galaxy/

rbatorsky/roi_validation

script to validate bmf and immunology roi variant sets that are loaded into nextcode

rbatorsky/singularity-recipes

rbatorsky/variant_filtering

scripts to process and annotate variant call files

rbatorsky/VASaliva

Analysis and plotting scripts used for the VA Saliva-Blood comparison October 2015