arikat
UCSD and UGA alumnus. Protein Engineer at Ginkgo Bioworks. Research Interests: STEM Education, CompChem, Bioinformatics, & Glycobiology
University of GeorgiaAtlanta
Pinned Repositories
alphaFilter
A tool to filter alphafold2 models by mean pLDDT confidence.
Arikat-Additional-Files
additional files for the Github website repo
arikat.github.io
Website using Github Pages
art
art gallery
GapClean
A tool for cleaning sequence alignments.
Glydentify
A deep learning tool for classifying Glycosyltransferase function
GTA_PBC_Core_analysis
Code for the GTA hydrophobic core manuscript
GTxplorer
PathInsight
App for modeling the effects of small binding molecules on pathways in Cytoscape
SecretBox
Collection of bioinformatics scripts for the Kannan Lab
arikat's Repositories
arikat/GapClean
A tool for cleaning sequence alignments.
arikat/PathInsight
App for modeling the effects of small binding molecules on pathways in Cytoscape
arikat/SecretBox
Collection of bioinformatics scripts for the Kannan Lab
arikat/alphaFilter
A tool to filter alphafold2 models by mean pLDDT confidence.
arikat/Arikat-Additional-Files
additional files for the Github website repo
arikat/arikat.github.io
Website using Github Pages
arikat/art
art gallery
arikat/Glydentify
A deep learning tool for classifying Glycosyltransferase function
arikat/GTA_PBC_Core_analysis
Code for the GTA hydrophobic core manuscript
arikat/GTxplorer
arikat/proteinER
Supporting code for the paper "Measuring evolutionary rates of proteins in a structural context"
arikat/RFdiffusion
Code for running RFdiffusion