Dynamo: Mapping Vector Field of Single Cells
Inclusive model of expression dynamics with metabolic labeling based scRNA-seq / multiomics, vector field reconstruction, potential landscape mapping and differential geometry analyses.
Installation - Ten minutes to dynamo - Tutorials - API - Citation - Theory
Documentation of Dynamo and Related Tutorial Notebooks
- introduction
- zebrafish
- differential geometry
- scNT-seq
- scEU
- cell cycle
- organoid
Discussion
Please use github issue tracker to report coding related issues of dynamo. For community discussion of novel usage cases, analysis tips and biological interpretations of dynamo, please join our public slack workspace: dynamo-discussion (Only a working email address is required from the slack side).
Contribution
If you want to contribute to the development of dynamo, please check out CONTRIBUTION instruction: Contribution