arleyc
Adjunct Professor in CENUR Noreste, Universidad de la República (Rivera, Uruguay) working on biogeography and evolutionary biology.
Universidad de la RepúblicaRivera, Uruguay
Pinned Repositories
areaPD
The package areaPD contains functions for calculating phylogenetic diversity (PD) for a set of geographic areas, calculating complementarity PD given a selected area, and drawing a Venn's diagram of PD within and between areas, given a phylogenetic tree and an assignment of samples (e.g., alleles, species, etc.) to areas.
P2C2M2
R package to test the multi-species coalescent model using trees estimated with starBEAST2 and to estimate false-positive error rates based on samples from the posterior predictive distributions
PCAtest
R package PCAtest for evaluating the statistical significance of PCA analysis, selecting number of significant PC axes, and testing the contributions of the variables to those PCs.
arleyc's Repositories
arleyc/PCAtest
R package PCAtest for evaluating the statistical significance of PCA analysis, selecting number of significant PC axes, and testing the contributions of the variables to those PCs.
arleyc/areaPD
The package areaPD contains functions for calculating phylogenetic diversity (PD) for a set of geographic areas, calculating complementarity PD given a selected area, and drawing a Venn's diagram of PD within and between areas, given a phylogenetic tree and an assignment of samples (e.g., alleles, species, etc.) to areas.
arleyc/P2C2M2
R package to test the multi-species coalescent model using trees estimated with starBEAST2 and to estimate false-positive error rates based on samples from the posterior predictive distributions