asoplata
Postdoctoral Researcher at the EPFL-Blue Brain Project, simulating the thalamus. He/him. PhD in Computational Neuroscience.
EPFL, Blue Brain ProjectGeneva, Switzerland
Pinned Repositories
Awesome-CV
:page_facing_up: Awesome CV is LaTeX template for your outstanding job application
bin
Simple bash scripts that are useful
dissertation
Custom MATLAB code for figure generation of my Dissertation, Chapter 2
DynaSim
DynaSim toolbox for modeling and simulating dynamical systems
dynasim-benchmark-brette-2007
DynaSim code and mechanisms for benchmarking to (Brette et al. 2007)
dynasim-extended-benita-model
DynaSim mechanism files for simulating thalamically-extended (Benita et al., 2012) Slow Wave model
open-computational-neuroscience-resources
A publicly-editable collection of open computational neuroscience resources
open-science-resources
A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.
propofol-coupling-2017-full
Complete DynaSim code for reproduction of (Soplata et al., 2017)
propofol-coupling-2017-mechanisms
DynaSim mechanism files for reproduction of (Soplata et al., 2017)
asoplata's Repositories
asoplata/dynasim-benchmark-brette-2007
DynaSim code and mechanisms for benchmarking to (Brette et al. 2007)
asoplata/propofol-coupling-2017-mechanisms
DynaSim mechanism files for reproduction of (Soplata et al., 2017)
asoplata/Awesome-CV
:page_facing_up: Awesome CV is LaTeX template for your outstanding job application
asoplata/dissertation
Custom MATLAB code for figure generation of my Dissertation, Chapter 2
asoplata/evernote-to-markdown
A VERY rough, first-pass Evernote-text-notes converter to Markdown files that I wrote two years ago. USE AT YOUR OWN RISK. Consider it pre-alpha. At the time, it seemed to do the job fine for plaintext Evernote notes.
asoplata/poorquery
Matches regex-identified png-files anywhere on a filesystem and outputs an HTML file displaying them
asoplata/x12-hodgkin-huxley-units-deriv
A small derivation of the units commonly used in Hodgkin-Huxley neural models
asoplata/awesome
:sunglasses: Curated list of awesome lists
asoplata/bu-cnso.github.io
The new BU CNSO webpage, hooray!
asoplata/c_elegans_neural_simulation
Brief network analysis and simulation of a C. Elegans connectome.
asoplata/ching2010_tcre_dynasim_mechanisms
DynaSim-compatible mechanism files for simulation of the thalamus of (Ching et al., 2010).
asoplata/diff
Python script that compares two HDF5 files.
asoplata/dynasim-mccarthy-2008-model
DynaSim implementation of the (McCarthy et al., 2008) cortical model
asoplata/iv
Needed for NEURON GUI
asoplata/MultiDimensionalDictionary
MATLAB MultiDimensional Dictionary class
asoplata/neurolinks
Links to Neuroscience tools, portals, initiatives, and more!
asoplata/nsdf
Neuroscience Simulation Data Format
asoplata/unit-test
Unit testing framework for the DynaSim toolbox