/HIV_Exposed_Infants

Data, code, and figures for the HIV-exposed Zambian infant NP microbiome paper

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Characterization of longitudinal nasopharyngeal microbiome patterns in maternally HIV-exposed Zambian infants

Data, code, and figures for the HIV-exposed Zambian infant NP microbiome paper.

PathoScope Indices

The RefSeq 2018 indices can be downloaded here.

Raw data (FASTQ files)