awohns
Statistical Genetics Researcher at Stanford School of Medicine
Stanford University School of MedicineStanford, CA
Pinned Repositories
109-Final-Project
CS109
2015lab1
2015lab2
5primeutr
adding-species-manuscript
manuscript materials for the adding species paper
ldgm
Software for linkage disequilibrium graphical models
ldgm_paper
Code for the LDGM paper.
tree-sequence-phyloseminar
Jupyter notebook to accompany tree sequence fundmentals phyloseminar
tspyro
Joint inference of geography and time using Pyro and tree sequences
unified_genealogy_paper
A Unified Genealogy of Modern and Ancient Humans
awohns's Repositories
awohns/unified_genealogy_paper
A Unified Genealogy of Modern and Ancient Humans
awohns/ldgm
Software for linkage disequilibrium graphical models
awohns/tspyro
Joint inference of geography and time using Pyro and tree sequences
awohns/ldgm_paper
Code for the LDGM paper.
awohns/tree-sequence-phyloseminar
Jupyter notebook to accompany tree sequence fundmentals phyloseminar
awohns/109-Final-Project
CS109
awohns/5primeutr
awohns/adding-species-manuscript
manuscript materials for the adding species paper
awohns/aneurysm_genetics
Analysis and figures for aneurysm genetics project
awohns/appendix
awohns/appendix_2
Damage Plots for St John's Samples.
awohns/firefly
awohns/gdf5_tsinfer
awohns/height
awohns/msprime
Simulate genealogical trees and genomic sequence data using population genetic models
awohns/neolithic-tsinfer
Run modern descendants analysis for "Kinship and burial in a late Neolithic Cambridgeshire site"
awohns/networkx
Network Analysis in Python
awohns/relative-allele-age
Code for relative allele age work and transfer report
awohns/roman_britain
awohns/selection
awohns/selection_v4
awohns/simulatingcasecontroldata
awohns/stdpopsim
A library of standard simulation models for msprime
awohns/treeseq-inference
Work for the tree sequence inference paper.
awohns/tsinfer
Infer a tree sequence from genetic variation data
awohns/tsinfer-benchmarking
awohns/tskit
The tree sequence toolkit
awohns/unified_genealogy
awohns/what-is-an-arg-paper
Manuscript and code for the "What is an ARG?" paper
awohns/withrsid