axelalmet/flowsig

Issues

• unexpected keyword argument 'validated_adjacency_key'

  #16 opened 3 months ago by ChloeHJ
  2

• ValueError: operands could not be broadcast together with shapes (5305,10) (18027,) (5305,10)

  #15 opened 3 months ago by wangqihao-code
  1

• How to explore the result?

  #14 opened 3 months ago by LJZYaaa
  3

• How to construct the flow expression matrices?

  #10 opened 4 months ago by yixudong
  4

• NumericalDivergenceError of fs.pp.construct_gems_using_nsf function

  #13 opened 4 months ago by DBinary
  4

• KeyError: (19, 11)" AND AttributeError: module 'flowsig.plotting' has no attribute 'plot_differentially_flowing_signals'"

  #11 opened 4 months ago by YuNong-Qiu
  4

• Where is the 'GEM' information used for plotting dot plots and heatmaps stored?

  #9 opened 4 months ago by changqinglu
  1

• unhashable type: 'Series'

  #12 opened 3 months ago by LJZYaaa
  7

• input file format

  #7 opened 4 months ago by skytguuu
  13

• AttributeError: 'AnnData' object has no attribute 'flatten'

  #4 opened 4 months ago by WangShuai-3
  4

• How to identify the 'flow_network' in plot_intercellular_flows_from_inflows?

  #3 opened 4 months ago by changqinglu
  3

• How to plot differentially flowing signals?

  #8 opened 4 months ago by changqinglu
  1

• Error in Construct GEMs

  #6 opened 4 months ago by yixudong
  3

• How are unique outflows defined?

  #5 opened 4 months ago by wangtanzhang612
  1

• ValueError: too many values to unpack (expected 2)

  #1 opened 4 months ago by OMIC-coding
  3

• Error occurs when using all CellChat interaction types

  #2 opened 4 months ago by wangtanzhang612
  2