azimov
Epidemiology Analytics and Open Source Software Development with a background in Computational Systems Biology
Janssen R&DWhistler, BC
azimov's Stars
ricklamers/gridstudio
Grid studio is a web-based application for data science with full integration of open source data science frameworks and languages.
pyqt/examples
Learn to create a desktop app with Python and Qt
opencobra/cobrapy
COBRApy is a package for constraint-based modeling of metabolic networks.
t-makaro/animatplot
A python package for animating plots build on matplotlib.
OHDSI/Atlas
ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data
OHDSI/WebAPI
OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications
opencobra/memote
memote – the genome-scale metabolic model test suite
vidify/vidify
Detect the songs playing on your device and play their music videos anywhere
biosustain/cameo
cameo - computer aided metabolic engineering & optimization
atishay/vscode-allautocomplete
Autocomplete from open files for VSCode
briancappello/flask-unchained
The quickest and easiest way to build large web apps and APIs with Flask
oliverSI/flask-restful-authentication
An example for RESTful authentication using nginx, uWSGI, Flask, MongoDB and JSON Web Token(JWT).
xgfs/NetLSD
NetLSD descriptors for graphs. Compare and analyze graph structure on multiple levels!
OHDSI/CohortDiagnostics
An R package for performing various cohort diagnostics.
OHDSI/StudyProtocols
Repository of OHDSI Collaborative Research Protocols
lecardozo/rworker
Celery worker for R tasks! Celery :left_right_arrow: R
cdanielmachado/embl_gems
EMBL GEMs: A collection of GEnome-scale Models for bacterial species
OHDSI/Hades
Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.
OHDSI/Capr
Cohort definition Application Programming in R
jbadger3/inspectomop
SBRCNottingham/gsmodutils
A utility framework for the management of genome-scale metabolic models.
OHDSI/ROhdsiWebApi
An R package for interfacing with a WebAPI instance
OHDSI/OhdsiShinyModules
An R package containing Shiny modules used by various OHDSI Shiny apps
OHDSI/SelfControlledCohort
An R package for performing self-controlled cohort analyses, a method to estimate risk by comparing time exposed with time unexposed among the exposed cohort.
SBRCNottingham/cluster_query_tool
Cluster query tool
ParkinsonLab/DETECT-v2
Version 2 of the Density Estimation Tool for Enzyme ClassificaTion: scripts for enzyme annotation and pipeline for making the DETECT database
OHDSI/ResultModelManager
RMM is an R package designed to handle common ohdsi results data management functions by providing a common API for data model migrations and definitions
azimov/cigram
Circular Gaussian Random grAph Model
OHDSI/CemConnector
An R package for connecting to the Common Evidence Model (CEM)
OHDSI/shinyModuleViewer