babaknaimi
I am a senior researcher of the University of Helsinki. I am interested in spatial and spatiotemporal statistics, spatiotemporal modelling, and Geo-informatics!
Helsinki
Pinned Repositories
elsa
A framework that provides the methods for quantifying entropy-based local indicator of spatial association (ELSA) that can be used for both continuous and categorical data. This package offers other methods to measure local indicators of spatial associations (LISA). Furthermore, global spatial structure can be measured using a variogram-like diagram, called entrogram.
ICZM_SDSS
A Spatial Decision Support Systems (SDSS) for ICZM
mct
Map Comparison Tools
moveStore
The moveStore project, supported by Max Plank Institute for Ornithology in Radolfzell, Germany that is a platform to provide a specific repository for web-based applications (developed in R and Shiny framework) that work with movement data. This framework can support methodological developments that have been implemented as a suit of functions and classes. moveStore is an open-source and extensible framework that intends to facilitate sharing and distributing of software applications dealing with movement data. Users can share the analytical functions, procedures, workflows either packaged as software applications (Apps) or developed as simple functions. The contributions, followed by appropriate metadata, can then be accessible by other users through Max Planck Cloud Services, or through the moveStore R package. Given that the applications in moveStore are developed using R shiny web framework, this Docker image is designed to provide a container with R and shiny as well as the libraries and packages (e.g., for geospatial supports) that may be required by different Apps.
mraster
mmap raster: a solution to deal with big raster/image data
rts
Raster Time Series Analysis
sdm
sdm is an extensible framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.
spdynamic
spdynamic is a framework to implement spatially-explicit dynamic simulation models. This package provides easy to use functions to organize scenarios of spatial dynamic simulations as well as read, visualize and access spatio-temporal data in the models.
StellaR
A Python application to translate System Dynamic Models developed in STELLA to R
usdm
Uncertainty Analysis for Species Distribution Modelling
babaknaimi's Repositories
babaknaimi/sdm
sdm is an extensible framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.
babaknaimi/elsa
A framework that provides the methods for quantifying entropy-based local indicator of spatial association (ELSA) that can be used for both continuous and categorical data. This package offers other methods to measure local indicators of spatial associations (LISA). Furthermore, global spatial structure can be measured using a variogram-like diagram, called entrogram.
babaknaimi/rts
Raster Time Series Analysis
babaknaimi/ICZM_SDSS
A Spatial Decision Support Systems (SDSS) for ICZM
babaknaimi/spdynamic
spdynamic is a framework to implement spatially-explicit dynamic simulation models. This package provides easy to use functions to organize scenarios of spatial dynamic simulations as well as read, visualize and access spatio-temporal data in the models.
babaknaimi/usdm
Uncertainty Analysis for Species Distribution Modelling
babaknaimi/mraster
mmap raster: a solution to deal with big raster/image data
babaknaimi/StellaR
A Python application to translate System Dynamic Models developed in STELLA to R
babaknaimi/babaknaimi
Source universe for: babaknaimi
babaknaimi/mct
Map Comparison Tools
babaknaimi/moveStore
The moveStore project, supported by Max Plank Institute for Ornithology in Radolfzell, Germany that is a platform to provide a specific repository for web-based applications (developed in R and Shiny framework) that work with movement data. This framework can support methodological developments that have been implemented as a suit of functions and classes. moveStore is an open-source and extensible framework that intends to facilitate sharing and distributing of software applications dealing with movement data. Users can share the analytical functions, procedures, workflows either packaged as software applications (Apps) or developed as simple functions. The contributions, followed by appropriate metadata, can then be accessible by other users through Max Planck Cloud Services, or through the moveStore R package. Given that the applications in moveStore are developed using R shiny web framework, this Docker image is designed to provide a container with R and shiny as well as the libraries and packages (e.g., for geospatial supports) that may be required by different Apps.
babaknaimi/ccm
babaknaimi/rgis_website
Contents of r-gis.net website!
babaknaimi/sdm_BookChapter
This is a chapter for the Book: R Coding for Ecology
babaknaimi/sdmverse
sdmverse is a collaborative metapackage for listing all the metadata of the Species Distribution Modelling (SDM) packages. sdmverse includes a graphical interface available locally or online (see below). sdmverse integrates metadata from SDM packages and checks their validity against the CRAN metadata for perenity.