baoxingsong

I am working at the Institute of Advanced Agricultural Sciences, Peking University

Institute of Advanced Agricultural Sciences, Peking UniversityChina

Pinned Repositories

AnchorWave
Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation
Language:C++145 8 5919
AnchorWave-MSA
Language:C++1 3 01
Baoxing-s-CV
Baoxing's CV
0 3 00
dCNS
conserved non-coding sequence
Language:C++14 4 184
GEAN
This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.
Language:C++44 3 88
genomeAlignment
Compare different genome alignment tools using a wide range of genomes with different complexities.
Language:HTML13 3 04
GWAS
The scripts I used for GWAS analysis.
Language:Python9 3 02
Irisas
Integrated region-based variants synchronization and Annotation for different inbreeding lines
Language:Java7 3 26
mlmm
multiallelic linear mixed model
Language:C++2 3 00
quota_Anchor
Strand and WGD aware syntenic gene identification
Language:Python2 3 01

baoxingsong's Repositories

baoxingsong/AnchorWave
Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation
Language:C++145 8 5919
baoxingsong/GEAN
This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.
Language:C++44 3 88
baoxingsong/dCNS
conserved non-coding sequence
Language:C++14 4 184
baoxingsong/genomeAlignment
Compare different genome alignment tools using a wide range of genomes with different complexities.
Language:HTML13 3 04
baoxingsong/GWAS
The scripts I used for GWAS analysis.
Language:Python9 3 02
baoxingsong/Irisas
Integrated region-based variants synchronization and Annotation for different inbreeding lines
Language:Java7 3 26
baoxingsong/mlmm
multiallelic linear mixed model
Language:C++2 3 00
baoxingsong/quota_Anchor
Strand and WGD aware syntenic gene identification
Language:Python2 3 01
baoxingsong/AnchorWave-MSA
Language:C++1 3 01
baoxingsong/baoxingsong.github.io
personal website
Language:HTML1 2 00
baoxingsong/GAPIT3
Genome Association Predict Integrate Tools
Language:R1 2 00
baoxingsong/MetaSee
An Interactive and Extendable Visualization Toolbox for Metagenomic Sample Analysis and Comparison
Language:HTML1 3 00
baoxingsong/The-second-hackation
The second hackathon at PKU-IAAS
Language:Jupyter Notebook1 2 00
baoxingsong/The-third-hackation
The third hackathon at PKU-IAAS
Language:Python10
baoxingsong/Baoxing-s-CV
Baoxing's CV
0 3 00
baoxingsong/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell2 0
baoxingsong/CNSpublication
Home made source code used for Andropogoneae CNS analysis
Language:HTML3 0
baoxingsong/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Language:Java3 0
baoxingsong/Meta-Mesh
Meta-Mesh: metagenomic data analysis system
Language:JavaScript3 0
baoxingsong/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Language:C2 0
baoxingsong/mixmogam
Mixed Model Package For Genome-wide association mapping.
Language:Python3 0
baoxingsong/MSA2pi
caculate pi value from multiple sequence alignment fasta file
Language:Java3 1
baoxingsong/mtmm
A mixed-model approach for genome-wide association studies of correlated traits in structured populations
Language:R3 0
baoxingsong/myBioUtil
My scripts
Language:Perl3 0
baoxingsong/parallelBlast
Language:Java3 01
baoxingsong/ppipp
PPIPP: an online protein-protein interaction network prediction and analysis platform
Language:JavaScript3 0
baoxingsong/PROPERseqTools
Language:Python1 0
baoxingsong/STSGP
Sequence-to-sequence gene structure predication
Language:Python3 0
baoxingsong/The-first-hackation-In-the-lab
Language:HTML3 0
baoxingsong/WSA
sequence alignment
Language:C++3 0