SimpleCTC
If you use this code or CTC in your work please cite the following publication:
Aydogan D.B. & Hyttinen J. “Contour tree connectivity of binary images from algebraic graph theory”, IEEE International Conference on Image Processing (ICIP), 15-22.09.2013, Melbourne, Australia
DESCRIPTION:
SimpleCTC simply computes the contour tree connectivity (CTC) of 2D/3D images.
Known dependencies are:
- SLEPc
- PETSc
- OpenMPI
It uses SimpleCT for contour tree computation. SimpleCTC contains seperate MATLAB and C++ routines to compute CTC.
C++ part includes all the functions necessary to compute CTC of a binary image, including boundary detection and signed Euclidean distance transform.
FAST GUIDE:
If you are familiar with MATLAB or intend to use SimpleCTC in MATLAB, please go to the "matlab" folder and read the README file. This explains and directs you on how to install and use SimpleCTC.
If you are planning to use SimpleCTC in C/C++, please go to "example" folder and read the README file.
LICENSE INFORMATION:
SimpleCTC is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
SimpleCTC is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.
Dogu Baran Aydogan - baran.aydogan@gmail.com 23.07.2014