Pinned Repositories
dipy
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
EDT
Euclidean Distance Transform
getStartedWithNifti_read
A short and effective crash course on reading three dimensional nifti images
purifibre
Purifibre removes spurious streamlines from tractograms
realTimeTractogramVisualizer
Real-time tractogram computer and visualizer
SimpleCT
SimpleCTC
TrackerYoga
Bend, twist, spread... TrackerYoga is a set of synthetic diffusion MRI data for testing tractography algorithms.
trekker
dMRI based fiber tracking using parallel transport tractography
baranaydogan's Repositories
baranaydogan/realTimeTractogramVisualizer
Real-time tractogram computer and visualizer
baranaydogan/purifibre
Purifibre removes spurious streamlines from tractograms
baranaydogan/SimpleCT
baranaydogan/SimpleCTC
baranaydogan/TrackerYoga
Bend, twist, spread... TrackerYoga is a set of synthetic diffusion MRI data for testing tractography algorithms.
baranaydogan/trekker
dMRI based fiber tracking using parallel transport tractography
baranaydogan/dipy
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
baranaydogan/dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
baranaydogan/EDT
Euclidean Distance Transform
baranaydogan/getStartedWithNifti_read
A short and effective crash course on reading three dimensional nifti images
baranaydogan/GUIDE-IN-TMS
baranaydogan/qmenta-sdk-example-irontract-challenge
An example of a QMENTA-compatible tool with all the required files to build and test it.
baranaydogan/qmenta-sdk-irontract-challenge
qmenta-sdk-irontract-challenge