This is a MATLAB UI created to reannotate MRI images with 'scribbles' in order to use the ACDC Dataset with a weakly supervised CNN
Author: Basil Mustafa (email)
The main script is freehand_scribble.m
, which takes in an image,
ground truth and current scribble as inputs and provides a UI to annotate them.
scribble_hdf5.m
and scribble_niifti.m
are examples which interface
with the scribble annotator - these will likely have to be heavily modified/
rewritten to match your data structure.
- Currently have to input an array of zeros if there is no current scribble -
should adjust
freehand_scribble.m
to automatically use blank array of size matching the ground truth if there is no input given