Pinned Repositories
2020-12-01-edinburgh-bio-online
AMR-protocols
a set of curated AMR protocols for the community
bawee.github.io
Agency Theme for Jekyll
BeatsonLab-MicrobialGenomics.github.io
Lab Website
blastable
Generates table of blast hits
bwast
Command line BLAST made-easy
examples
Microbiome Informatics - API and service usage examples
glosario
A multilingual glossary package.
merge-genbank
Merge multiple genbank files (e.g Draft genomes)
taxonomy
A pipeline to identify patterns in LGT regions based on the closest hit of each gene in NR
bawee's Repositories
bawee/bwast
Command line BLAST made-easy
bawee/taxonomy
A pipeline to identify patterns in LGT regions based on the closest hit of each gene in NR
bawee/blastable
Generates table of blast hits
bawee/merge-genbank
Merge multiple genbank files (e.g Draft genomes)
bawee/2020-12-01-edinburgh-bio-online
bawee/AMR-protocols
a set of curated AMR protocols for the community
bawee/bawee.github.io
Agency Theme for Jekyll
bawee/BeatsonLab-MicrobialGenomics.github.io
Lab Website
bawee/examples
Microbiome Informatics - API and service usage examples
bawee/glosario
A multilingual glossary package.
bawee/gubbins
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
bawee/homebrew-cbl
Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science
bawee/kraken-biom
Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).
bawee/post_fastGEAR
Post fastGEAR plotting script
bawee/poster_links1
bawee/Practical1
Python programming
bawee/ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
bawee/remove-uniformative-sites
Script to remove phylogenetically uninformative sites from a multiple alignment
bawee/SeqFindR
A tool to easily create informative genomic feature plots
bawee/SeqFindR-2013
A tool to easily create informative genomic feature plots
bawee/seqhandler
bawee/snippy
:scissors: :zap: Rapid bacterial SNP calling and core genome alignments
bawee/swcarpentry
Software carpentry git tutorial
bawee/test_jekyll
bawee/thea-gs
THEA-GS Website and documentation
bawee/Treemmer
bawee/wf-bacterial-genomes
Small variant calling for haploid samples