bbfrederick/rapidtide

Issues

• fMRIPost-rapidtide project

  #166 opened 4 months ago by tsalo
  3

• Not able to generate desc-shiftedtcs_bold NIFTI using documentation instructions

  #156 opened 6 months ago by nnmenon
  3

• RuntimeError: Undefined plan with threads. This is a bug

  #152 opened 6 months ago by dangom
  1

• Clarification about using freesurfer-produced segmentations in denoising

  #147 opened 8 months ago by themeo
  2

• When running, report the current version number.

  #91 opened a year ago by dmd
  3

• --version does not work inside Docker

  #96 opened a year ago by dmd
  1

• switch to aws mountpoint at some point

  #104 opened a year ago by dmd
  2

• Latest version in docker does not run

  #122 opened a year ago by dittothat
  3

• More PNC

  #107 opened 2 years ago by poeplau
  4

• rapidtide stops without error messages

  #116 opened a year ago by Ludoalevesque
  13

• Brain mask too aggressively eroded?

  #117 opened a year ago by themeo
  2

• --acfix in rapidtide does not work

  #115 opened a year ago by themeo
  7

• rapidtide hangs

  #113 opened a year ago by themeo
  3

• Physiological Noise Correction

  #106 opened a year ago by poeplau
  4

• --nofitfilt without effect

  #114 opened a year ago by poeplau
  1

• aligntcs.py index issue

  #112 opened a year ago by benalibayram
  2

• RIPTiDe fundamentals

  #105 opened a year ago by poeplau
  4

• running rapidtide with no arguments gives usage string twice

  #94 opened 2 years ago by dmd
  0

• --version command doesn't work

  #92 opened 2 years ago by dmd
  1

• clean up docker build cruft

  #97 opened 2 years ago by dmd
  0

• warning about urllib or something

  #95 opened 2 years ago by dmd
  2

• If docker container is run with no arguments, cloud mode error is given.

  #93 opened 2 years ago by dmd
  1

• replace progressbar with tqdm

  #80 opened 2 years ago by dmd
  1

• use skopeo in a GHA to copy to ECR

  #89 opened 2 years ago by dmd
  1

• support multiarchitecture - arm/graviton

  #82 opened 2 years ago by dmd
  1

• pyfftw nthreads error

  #79 opened 3 years ago by robbwh
  3

• --norefinedespeckled timeshift applied to negative number of voxels

  #78 opened 3 years ago by robbwh
  4

• despeckle_thresh logic

  #77 opened 3 years ago by robbwh
  3

• Matplotlib runtime from docker image run

  #76 opened 3 years ago by chienc1
  3

• Maxcorr map voxel =1 bug?

  #73 opened 3 years ago by robbwh
  13

• Publish Docker image automatically on release with GitHub Actions

  #74 opened 3 years ago by tsalo
  1

• "rapidtide2 is a rapidtide script, but is not installed" after Docker installation

  #69 opened 3 years ago by cauzzo-s5
  7

• -d/dt fMRI signal for BOLD-CSF inflow coupling analysis

  #67 opened 4 years ago by robbwh
  6

• Switch from printing to logging messages

  #41 opened 4 years ago by tsalo
  6

• master branch renamed to main

  #63 opened 4 years ago by bbfrederick
  0

• Deploy package to PyPi

  #35 opened 4 years ago by tsalo
  14

• Python Install line error

  #62 opened 4 years ago by jmatthews-rotman
  5

• Support moving average-based PCA dimensionality estimation

  #51 opened 4 years ago by tsalo
  5

• Including column number for cardiacfile takes respiratory signal instead of cardiac in happy V2.0alpha12

  #58 opened 4 years ago by NigelCol
  1

• Issue finishing happy using external cardiacfile in happy V2.0alpha12

  #59 opened 4 years ago by NigelCol
  7

• Error including cardiacfile from .tsv file is broken in 2.0a11

  #57 opened 4 years ago by NigelCol
  2

• Consider enabling Discussions feature for support

  #52 opened 4 years ago by tsalo
  3

• happy motion regression broken in 2.0a10 but not 1.9.x

  #54 opened 4 years ago by robbwh
  3

• Run black automated code formatter on package

  #48 opened 4 years ago by tsalo
  9

• Continue to perform regressor refinement until regressor convergence

  #50 opened 4 years ago by robbwh
  8

• Denoising fails on nilearn dataset

  #49 opened 4 years ago by tsalo
  5

• Follow BIDS-Derivatives convention for outputs

  #42 opened 4 years ago by tsalo
  11

• ReadTheDocs build failing on dev branch

  #44 opened 4 years ago by tsalo
  3

• Max correlation at initial corrout volume results in 0 R2, lagstrength, and lagtime.

  #43 opened 4 years ago by ahmedhumza94
  2

• Build docs in CI

  #34 opened 4 years ago by tsalo
  2