bbglab/intogen-plus

Issues

• IntOGen-plus | build container improvement

  #38 opened 3 months ago by FedericaBrando
  1

• IntOGen plus | CBase error few mutated cohort

  #4 opened a year ago by FedericaBrando
  10

• When downloading mupit_modbase.sql.gz (Network is unreachable)

  #34 opened 3 months ago by JIAJZHAN-Kairos
  5

• IntOGen Plus | Rebuild core container

  #33 opened 4 months ago by FedericaBrando
  1

• IntOGen Plus | 2024 Release

  #25 opened 6 months ago by FedericaBrando
  0

• IntOGen Plus | Update ReadTheDocs

  #30 opened 4 months ago by FedericaBrando
  1

• IntOGen Plus | Update cbase container version from v1.1 to v1.2

  #29 opened 6 months ago by migrau
  0

• IntOGen Plus | Add filtering of MNVs to the parsed output of VEP

  #27 opened 7 months ago by FedericaBrando
  0

• IntOGen Plus | Check what it is necessary in `extra/` folder

  #26 opened 6 months ago by FedericaBrando
  2

• IntOGen-BoostDM connection | redefine regions

  #20 opened 7 months ago by FedericaBrando
  9

• IntOGen-plus | Add helthcheck for regions

  #23 opened 7 months ago by FedericaBrando
  0

• IntOGen-plus | unfiltered drivers shows NaNs

  #19 opened 7 months ago by FedericaBrando
  2

• IntOGen-plus | Combination fails if gene has no symbol

  #22 opened 7 months ago by FedericaBrando
  2

• IntOGen v2024 | Check FAIL cohorts

  #18 opened 7 months ago by FedericaBrando
  1

• IntOGen plus | Update to MANE transcript

  #2 opened 8 months ago by FedericaBrando
  13

• IntOGen plus | Update CGC dataset version

  #7 opened 8 months ago by FedericaBrando
  2

• IntOGen Plus | Revise `vep.py` VALID_CONSEQUENCE set

  #13 opened 8 months ago by FedericaBrando
  8

• IntOGen plus | Combination container fail build

  #5 opened a year ago by FedericaBrando
  0

• IntOGen plus | data build - HotMAPS pdb download fail

  #9 opened a year ago by FedericaBrando
  1

• IntOGen Plus | Update SEISMIC to fast version

  #14 opened 9 months ago by FedericaBrando
  1

• IntOGen Plus | Grid search for fitting the optimal method combination is inefficient and not scalable

  #11 opened a year ago by koszulordie
  6

• IntOGen Plus | Oncodrive3D v0.1 + LHS combination

  #12 opened 10 months ago by FedericaBrando
  1

• IntOGen Plus | Oncodrive3D implementation and testing

  #10 opened a year ago by FedericaBrando
  4

• IntOGen plus | data build - Hotmaps mupit_modbase.sql failing

  #8 opened a year ago by FedericaBrando
  3

• IntOGen Plus | git lfs track dndscv.tar.gz

  #1 opened a year ago by FedericaBrando
  1