v2.1.9 does not output `send` correctly when using long-read mode
xinehc opened this issue · 2 comments
xinehc commented
v2.1.8:
diamond blastx -q GCF_000708165.1_E_coli_EC2.contigs_genomic.fna -d a.fasta --range-culling -F15 --outfmt 6 qseqid sseqid sstart send scovhsp
NZ_JFJL01000045.1 WP_000046661.1 1 109 100
v2.1.9:
diamond blastx -q GCF_000708165.1_E_coli_EC2.contigs_genomic.fna -d a.fasta --range-culling -F15 --outfmt 6 qseqid sseqid sstart send scovhsp
NZ_JFJL01000045.1 WP_000046661.1 1 0 100
The send column in v2.1.9 is always 0 (bug?). scovhsp seems correct.
thackl commented
I have the same problem. send is reported as 0 in v2.1.9.
@xinehc I think you accidentally put qend in the title of the issue.
Pooryamb commented
The same issue happened to me!
send is 0