Matplotlib new version not compatible with standard QCs plot

[ajulienla]

Dear All,
Recent ad-hoc installation of Besca can not run properly the standard workbook as basey is not a keyword anymore.
Current workaround asis is downgrading matplotlib:

pip install matplotlib==3.3.4

(in a conda environment)

Seems to be an "old" issue:
https://stackoverflow.com/questions/71213873/receiving-typeerror-init-got-an-unexpected-keyword-argument-basey-in

Maybe pinning down version for all as suggested would be a good option for next releases.

Best
Alice :)

[Accio]

Thanks Alice, I am working on this, while updating the dependency to scanpy 1.8.2: master...Accio:scanpy1.8.2. This should be released in the next few days, it is now being tested.

[hatjek]

Hi @ajulienla ,
Good to hear from you and thanks for your issue! This should be solved with the new update from David #194 . Could you maybe give it a try? Then we can close the issue.
Thanks and all the best
Klas

[ajulienla]

Hi,
The install works perfectly for me as long as I do not use R wrappers.! Thank you @Accio.