Pinned Repositories
acropora_palmata_field_transcriptomics
Transcriptomic analysis of 4 genets of Acropora palmata at 3 reef sites in the Florida Keys over a year period.
effects_OA_on_coral_rubble_prokaryotic_assemblages
Identifying how the prokaryotic community dynamics of coral rubble shift due to different reef locations and different OA treatments.
innate_immune_response_acropora_palmata
All scripts for transcriptomic analysis of healthy and diseased Acropora palmata in 2016 and 2017 disease challenge experiments
Mayfly_gill_transcriptomics
De-novo transcriptome assembly of mayfly gills exposed to freshwater and saltwater.
ML_fungal_culture_predicition
Utilising supervised machine learning and neural nets to predict culture medium from genes and proteins for unculturable fungal species.
opsanus_beta_genome
Gulf Toadfish (Opsanus beta) Genome Assembley
orbicella_faveolata_pacbio_genome_transcriptome
All analysis scripts for genome and transcriptome assembly of Orbicella faveolata using PacBio long read sequencing.
POR
Tagseq and 16s analysis of Acropora palmata field samples
resposne_of_acropora_palmata_to_disease_and_heat
All scripts and pipelines for bioinformatic analyses of 3 prime RNA-seq and 16S rRNA data
funannotate
Eukaryotic Genome Annotation Pipeline
benyoung93's Repositories
benyoung93/orbicella_faveolata_pacbio_genome_transcriptome
All analysis scripts for genome and transcriptome assembly of Orbicella faveolata using PacBio long read sequencing.
benyoung93/acropora_palmata_field_transcriptomics
Transcriptomic analysis of 4 genets of Acropora palmata at 3 reef sites in the Florida Keys over a year period.
benyoung93/effects_OA_on_coral_rubble_prokaryotic_assemblages
Identifying how the prokaryotic community dynamics of coral rubble shift due to different reef locations and different OA treatments.
benyoung93/innate_immune_response_acropora_palmata
All scripts for transcriptomic analysis of healthy and diseased Acropora palmata in 2016 and 2017 disease challenge experiments
benyoung93/Mayfly_gill_transcriptomics
De-novo transcriptome assembly of mayfly gills exposed to freshwater and saltwater.
benyoung93/ML_fungal_culture_predicition
Utilising supervised machine learning and neural nets to predict culture medium from genes and proteins for unculturable fungal species.
benyoung93/opsanus_beta_genome
Gulf Toadfish (Opsanus beta) Genome Assembley
benyoung93/POR
Tagseq and 16s analysis of Acropora palmata field samples
benyoung93/resposne_of_acropora_palmata_to_disease_and_heat
All scripts and pipelines for bioinformatic analyses of 3 prime RNA-seq and 16S rRNA data