Pinned Repositories
10x-scATAC-2019
Publication Page for Satpathy*, Granja* et al 2019
baiyinyun
佰茵云后台管理系统
Beautiful-Visualization-with-R
《R语言数据可视化之美》配套代码
biocode
Bioinformatics code libraries and scripts
bms038_analysis
Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for manuscript https://doi.org/10.1016/j.cell.2017.09.028 See also http://www.ioexplorer.org for interactive visuallization
breast_cancer_panel
Breast Cancer Study
cfNA
Chloroplast-genome-assembly
A pipeline for assemble chroloplast genome using short/long reads
covid_balf
R script for the covid balf data analysis
CRC_scRNAseq
bigfacebig's Repositories
bigfacebig/Beautiful-Visualization-with-R
《R语言数据可视化之美》配套代码
bigfacebig/Chloroplast-genome-assembly
A pipeline for assemble chroloplast genome using short/long reads
bigfacebig/CRC_scRNAseq
bigfacebig/DeepSEM
bigfacebig/FindingInfo
bigfacebig/HumanPilot
Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
bigfacebig/idep
Integrated Differential Expression and Pathway analysis
bigfacebig/Immune_cells_analysis
bigfacebig/micgent
The main back-end component of NGS-MSTB: Next Generation Sequencing Microbial Surveillance Toolbox
bigfacebig/NAM-genomes
Detailed bioinformatics scripts and methods used in the NAM genome paper.
bigfacebig/novogene-disease-pipeline
bigfacebig/Post_Implantation
bigfacebig/reverse-proxy
Docker Image: Virtual Hosts Forward Proxy
bigfacebig/Rplots-NGS
R scripts for NGS data visualization
bigfacebig/Scar_manuscript_scripts
Scripts for analyses of scar data and data visualization, identifying evolutionarily independent isolates, and enumerating population level unique scar occurrences
bigfacebig/ScarTrek
Python package for identifying genetic changes in whole-genome sequencing data
bigfacebig/scDVA
An R shiny based tool used for single cell RNA-seq data visualization and analysis.
bigfacebig/scell_lung_adenocarcinoma
This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
bigfacebig/scisorseqr
bigfacebig/SCope
Fast visualization tool for large-scale and high dimensional single-cell data
bigfacebig/shiny-apps
A collection of web applications for exploring single cell RNA-seq data
bigfacebig/shiny-examples
bigfacebig/SmallRNA-seq
SmallRNA sequencing
bigfacebig/spatialLIBD
Code for the spatialLIBD R/Bioconductor package and shiny app
bigfacebig/sports1.1
Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
bigfacebig/st_pipeline
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
bigfacebig/TAR-scRNA-seq
scRNA-seq analysis beyond gene annotations using transcriptionally active regions (TARs) generated from sequence alignment data
bigfacebig/TidyTuesday
📊 My contributions to the #TidyTuesday challenge
bigfacebig/visium_heart
Spatial transcriptomics of heart tissue
bigfacebig/vulnerability_2021
Repository containing the code and methods for Bosch et al. 2021