Provide the number of k-mers in the query
Opened this issue · 3 comments
graceblackwell commented
Could the number of k-mers in the query be included in the output so the user can calculate the percentage of the query in each dataset (or provide the percentage as well)?
bingmann commented
Maybe we should define a better output format.
graceblackwell commented
Yeah could be useful! Would be nice to have it write to a file as well. Could do something like bigsi? Though have the query header instead of the query sequence
iqbal-lab commented
Output format an excellent idea.