diamond version Error
Opened this issue · 2 comments
when I run the deepgoplus/main.py,there is such an error. I think the build diamond version of train_data.dmnd is inconsistent with the diamond version I have installed on the system. How can I solve it?
2021-01-04 14:41:19.633481: W tensorflow/stream_executor/platform/default/dso_loader.cc:59] Could not load dynamic library 'libcudart.so.10.1'; dlerror: libcudart.so.10.1: cannot open shared object file: No such file or directory; LD_LIBRARY_PATH: /lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/local/cuda-9.0/lib64::/opt/MonitorSoftware/lib:/usr/sfw/lib:/usr/local/lib
2021-01-04 14:41:19.633534: I tensorflow/stream_executor/cuda/cudart_stub.cc:29] Ignore above cudart dlerror if you do not have a GPU set up on your machine.
diamond v0.9.14.115 | by Benjamin Buchfink buchfink@gmail.com
Licensed under the GNU AGPL https://www.gnu.org/licenses/agpl.txt
Check http://github.com/bbuchfink/diamond for updates.
#CPU threads: 48
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
#Target sequences to report alignments for: 25
Temporary directory: /tmp
Opening the database... [7e-05s]
Error: Database was built with a different version of diamond as is incompatible.
ERROR:root:Error running diamond!
Hi, you can rebuild the diamond database from train_data.fa (FASTA file). Use the following command:
diamond makedb --db data/train_data.dmnd --in data/train_data.fa
OK,thank you for your quick reply!