BioCore, NTNU

The Bioinformatics core facility at NTNU

Trondhjem, Norway

Pinned Repositories

bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell00
chip_seq_pipeline
ChIP-Seq Analysis Pipeline with emphasis on differential expression
Language:Python90
epic
(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER
Language:Python31 7 866
epic2
Ultraperformant reimplementation of SICER
Language:Cython55 3 759
hisat2_index
Language:Python0 3 00
kerneltree
Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.
Language:C25 4 12
ldetect_original
Language:Python00
snpflip
Report reverse and ambiguous strand SNPs in GWAS data
Language:Python33 2 98

BioCore, NTNU's Repositories

biocore-ntnu/epic2
Ultraperformant reimplementation of SICER
Language:Cython55 3 759
biocore-ntnu/snpflip
Report reverse and ambiguous strand SNPs in GWAS data
Language:Python33 2 98
biocore-ntnu/epic
(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER
Language:Python31 7 866
biocore-ntnu/kerneltree
Ultrafast interval trees from the kernel. Deprecated in favor of the NCLS.
Language:C25 4 12
biocore-ntnu/chip_seq_pipeline
ChIP-Seq Analysis Pipeline with emphasis on differential expression
Language:Python90
biocore-ntnu/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell00
biocore-ntnu/hisat2_index
Language:Python0 3 00
biocore-ntnu/ldetect_original
Language:Python00