biocyberman

Collaborate, share and work with open-source to bring values to science, industry, and society. Thank you for doing the same 😄 🙏

Novo NordiskAalborg, Denmark

Pinned Repositories

2024_DataEng
Data Engineering class
Language:HTML0 0 00
2029-09-18-aalborg
Language:Python0 1 00
aauLatexTemplates
A collection of Aalborg University LaTeX-templates
Language:TeX0 2 00
abra
Assembly Based ReAligner
Language:Java0 2 00
admiral
ADaM in R Asset Library
Language:R0 0 00
admiralmetabolic
Metabolic package extension of admiral
Language:R0 0 00
covid19
covid19
Language:Python1 1 00
METAREP
METAREP: JCVI Metagenomics Reports - an open source tool for high-performance comparative metagenomics
Language:PHP1 2 00
pindel
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
Language:SystemVerilog1 2 00
RAPIDR
RAPIDR: Reliable Accurate Prenatal non-Invasive Diagnosis R
Language:R1 2 00

biocyberman's Repositories

biocyberman/2029-09-18-aalborg
Language:Python0 1 00
biocyberman/aauLatexTemplates
A collection of Aalborg University LaTeX-templates
Language:TeX0 2 00
biocyberman/awesome-c
A curated list of awesome C frameworks, libraries, resources and other shiny things. Inspired by all the other awesome-... projects out there.
2 0
biocyberman/bcbio-nextgen
Best-practice pipelines for fully automated high throughput sequencing analysis
Language:Python
biocyberman/biocyb-travis
Travis test and delete soon
Language:Python1 01
biocyberman/biocyberman.github.io
Life and code
Language:HTML
biocyberman/chanjo
Chanjo provides a better way to handle sequence coverage data in clinical sequencing.
Language:Python
biocyberman/cheatsheets
My cheatsheets
Language:CSS1 0
biocyberman/dlang-tour-core
D Language online tour
Language:D
biocyberman/dlang-tour-english
Base language version of the Tour
2 0
biocyberman/drogi
Drone + Gitea
Language:Shell1 0
biocyberman/EDSF
Community supported EDISON Data Science Framework
1 0
biocyberman/enroot
A simple yet powerful tool to turn traditional container/OS images into unprivileged sandboxes.
Language:Shell1 0
biocyberman/fastaq
Fasta and FastQ tool written in D programming language.
Language:D
biocyberman/flaskr-tdd
Flaskr: Intro to Flask, Test-Driven Development (TDD), and JavaScript
Language:Python
biocyberman/genomics-workshop
Language:Python1 0
biocyberman/goleft
goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary
Language:Go
biocyberman/ibus
Intelligent Input Bus for Linux/Unix
Language:C
biocyberman/iopipe
D language library for modular io
Language:D
biocyberman/MetaboAnalystR
R package for MetaboAnalyst
Language:R1 0
biocyberman/phobos
The standard library of the D programming language
Language:D
biocyberman/singularity-compose
orchestration for singularity containers (under development)
Language:Python1 0
biocyberman/singularity-mariadb
An real-world-like example of using singularity compose
Language:Shell2 0
biocyberman/singularity-r
R in a Singularity container
Language:Roff1 0
biocyberman/spacemacs
A community-driven Emacs distribution - The best editor is neither Emacs nor Vim, it's Emacs *and* Vim!
Language:Emacs Lisp
biocyberman/TS
Torrent Suite
Language:Python2 0
biocyberman/valgrind
Experimental Version of Valgrind for macOS 10.14.6 Mojave and 10.15.1 Catalina
Language:C1 0
biocyberman/ValgrindDocker
Docker image for valgrind
Language:Shell2 0
biocyberman/wisecondor
WISECONDOR (WIthin-SamplE COpy Number aberration DetectOR): Detect fetal trisomies and smaller CNV's in a maternal plasma sample using whole-genome data. NEWS: NOW INCLUDES AN INTERACTIVE RESULT BROWSER.
Language:Python
biocyberman/word-count
Example project we use in the reproducibility and documentation lessons.
Language:Python1 01