Pinned Repositories
beataml2.0_data
Data accompanying the BeatAML2.0 manuscript
beataml2_manuscript
Workflow to reproduce results and figures for the second BeatAML manuscript
bias_fairness_in_ml
Applied Labs for 'Achieving Fairness in ML/AI'
cycIF-workflow
HitWalker2
HNSCC_Notebook
Workflow of light/dark pathways in HNSCC
MMDL_FL
Updating and refactoring to support a federated learning scenario
packageDir
pathway analysis package for HNSCC paper
pathLayerDistributionVersion2
Experimental version, ie: not guaranteed to function correctly!
SIG
Workflows and code for the Systems Immunogenetics project
Biodev - McWeeney Research Group 's Repositories
biodev/beataml2_manuscript
Workflow to reproduce results and figures for the second BeatAML manuscript
biodev/HitWalker2
biodev/beataml2.0_data
Data accompanying the BeatAML2.0 manuscript
biodev/MMDL_FL
Updating and refactoring to support a federated learning scenario
biodev/packageDir
pathway analysis package for HNSCC paper
biodev/SIG
Workflows and code for the Systems Immunogenetics project
biodev/batchtools
Tools for computation on batch systems
biodev/bias_fairness_in_ml
Applied Labs for 'Achieving Fairness in ML/AI'
biodev/cycIF-workflow
biodev/HNSCC_Notebook
Workflow of light/dark pathways in HNSCC
biodev/pathLayerDistributionVersion2
Experimental version, ie: not guaranteed to function correctly!
biodev/BatchJobs
BatchJobs: Batch computing with R
biodev/beataml_genomics
Public version of BeatAML workflow
biodev/gatk-protected
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
biodev/HTCondor_drivers
biodev/immpload
Immport upload preparation
biodev/openCyto
A package that provides data analysis pipeline for flow cytometry.
biodev/vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms